RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 HMMRO75330 724 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 TXNRD1Q16881 649 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 CCDC191Q8NCU4 936 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 KIF1BPQ96EK5 621 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 SUCLG2Q96I99 432 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 C16orf45Q96MC5 204 aaPredicted RBP13.03□□□□□ -0.32
TCF4-222ENST00000564228 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
TCF4-222ENST00000564228 UTYO14607 1347 aa13.03□□□□□ -0.32
TCF4-222ENST00000564228 SCN7AQ01118 1682 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 PNMA6EA0A0J9YXQ4 647 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 RPS6KA4O75676 772 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 F13A1P00488 732 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 ERO1AQ96HE7 468 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 PALD1Q9ULE6 856 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.32
TCF4-222ENST00000564228 MYH3P11055 1940 aa13.02□□□□□ -0.33
TCF4-222ENST00000564228 CAMTA2O94983 1202 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 CAPN2P17655 700 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 CDC25BP30305 580 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 ZSCAN25Q6NSZ9 544 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 PLA2G4DQ86XP0 818 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 SALL3Q9BXA9 1300 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 PLSCR1O15162 318 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 STX6O43752 255 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 NEMFO60524 1076 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 CYP2C19P33261 490 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 CCDC186Q7Z3E2 898 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 PROM2Q8N271 834 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 BICC1Q9H694 974 aaKnown RBP13.01□□□□□ -0.33
TCF4-222ENST00000564228 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
TCF4-222ENST00000564228 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
TCF4-222ENST00000564228 APBB1O00213 710 aa13□□□□□ -0.33
TCF4-222ENST00000564228 SRGAP3O43295 1099 aa13□□□□□ -0.33
TCF4-222ENST00000564228 HOMEZQ8IX15 550 aa13□□□□□ -0.33
TCF4-222ENST00000564228 KAZALD1Q96I82 304 aa13□□□□□ -0.33
TCF4-222ENST00000564228 H7C1W4 665 aa13□□□□□ -0.33
TCF4-222ENST00000564228 ZNF75DP51815 510 aa13□□□□□ -0.33
TCF4-222ENST00000564228 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
TCF4-222ENST00000564228 NLRP10Q86W26 655 aa13□□□□□ -0.33
TCF4-222ENST00000564228 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
TCF4-222ENST00000564228 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 KIF2AO00139 706 aaPredicted RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 ZPR1O75312 459 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 CHMLP26374 656 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 MAP3K11Q16584 847 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 EPHA10Q5JZY3 1008 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 TDRD7Q8NHU6 1098 aaKnown RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 ARHGEF1Q92888 912 aaKnown RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 FAM89AQ96GI7 184 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 KCND1Q9NSA2 647 aa12.99□□□□□ -0.33
TCF4-222ENST00000564228 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
TCF4-222ENST00000564228 AOX1Q06278 1338 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 SYT1P21579 422 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 CASP7P55210 303 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
TCF4-222ENST00000564228 TRAPPC3LQ5T215 181 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
TCF4-222ENST00000564228 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 ANO2Q9NQ90 1003 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
TCF4-222ENST00000564228 EXOC6BQ9Y2D4 811 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 MRVI1Q9Y6F6 885 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 ELP1O95163 1332 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 FIBPO43427 364 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 CAVIN2O95810 425 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 HSPA4P34932 840 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 RFC4P35249 363 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 TYRO3Q06418 890 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 LRMPQ12912 555 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 FBXO38Q6PIJ6 1188 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 ZBTB38Q8NAP3 1195 aaPredicted RBP12.98□□□□□ -0.33
TCF4-222ENST00000564228 SSH3Q8TE77 659 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
TCF4-222ENST00000564228 TRMT112Q9UI30 125 aaKnown RBP12.98□□□□□ -0.33
TCF4-222ENST00000564228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 MTX1Q13505 466 aa12.97□□□□□ -0.33
TCF4-222ENST00000564228 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 SYNE4Q8N205 404 aa12.97□□□□□ -0.33
TCF4-222ENST00000564228 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
TCF4-222ENST00000564228 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 ZNF215Q9UL58 517 aaPredicted RBP12.97□□□□□ -0.33
TCF4-222ENST00000564228 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
TCF4-222ENST00000564228 RAD50Q92878 1312 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms