RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	FAM89A	Q96GI7	184 aa		10.92	□□□□□ -0.66
CKLF-208	ENST00000563092	SCUBE2	Q9NQ36	999 aa		10.92	□□□□□ -0.66
CKLF-208	ENST00000563092	POTEF	A5A3E0	1075 aa		10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	RPS8	P62241	208 aa	Known RBP	10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	SCARF1	Q14162	830 aa		10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	ANGEL2	Q5VTE6	544 aa	Known RBP	10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	PSME4	Q14997	1843 aa		10.91	□□□□□ -0.66
CKLF-208	ENST00000563092	MAPK8IP3	Q9UPT6	1336 aa		10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	HOXB7	P09629	217 aa		10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	RIPK4	P57078	832 aa		10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	ANKRD13D	Q6ZTN6	518 aa		10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	CHPF2	Q9P2E5	772 aa		10.9	□□□□□ -0.66
CKLF-208	ENST00000563092	GPR25	O00155	361 aa		10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	IRS4	O14654	1257 aa	Predicted RBP	10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	TBC1D8	O95759	1140 aa		10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	TMPO	P42166	694 aa	Known RBP	10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	KRT24	Q2M2I5	525 aa		10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	MYOZ2	Q9NPC6	264 aa		10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.89	□□□□□ -0.67
CKLF-208	ENST00000563092	TTLL13P	A6NNM8	815 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	ATP5J2-PTCD1	G3V325	749 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	USP17L8	P0C7I0	530 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	MOB2	Q70IA6	237 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	GCC1	Q96CN9	775 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	SEC31B	Q9NQW1	1179 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	GGA1	Q9UJY5	639 aa		10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	ZNF646	O15015	1829 aa	Predicted RBP	10.88	□□□□□ -0.67
CKLF-208	ENST00000563092	BRCA2	P51587	3418 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	UBE2Q2L	H0YL09	131 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	UFL1	O94874	794 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	LMOD3	Q0VAK6	560 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	PODN	Q7Z5L7	613 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	ZNF428	Q96B54	188 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	DBF4	Q9UBU7	674 aa	Predicted RBP	10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	HDAC9	Q9UKV0	1011 aa		10.87	□□□□□ -0.67
CKLF-208	ENST00000563092	CENPF	P49454	3210 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	USP17L3	A6NCW0	530 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	USP17L4	A6NCW7	530 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	NUBP1	P53384	320 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	LDLRAD1	Q5T700	205 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	HDGFL1	Q5TGJ6	251 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	USP17L1	Q7RTZ2	530 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	R3HDML	Q9H3Y0	253 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	HYPK	Q9NX55	129 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	TRIM35	Q9UPQ4	493 aa		10.86	□□□□□ -0.67
CKLF-208	ENST00000563092	XDH	P47989	1333 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	MMP14	P50281	582 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	NBPF9	Q3BBW0	867 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	HABP4	Q5JVS0	413 aa	Known RBP	10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	DACT2	Q5SW24	774 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	ZBED3	Q96IU2	234 aa	Predicted RBP	10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	ANKIB1	Q9P2G1	1089 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	PCDHB13	Q9Y5F0	798 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	LAMB1	P07942	1786 aa		10.85	□□□□□ -0.67
CKLF-208	ENST00000563092	WTIP	A6NIX2	430 aa	Predicted RBP	10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	WNT10B	O00744	389 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	FKTN	O75072	461 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	PCCA	P05165	728 aa	Predicted RBP	10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	HSP90B1	P14625	803 aa	Known RBP	10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	ATP2B4	P23634	1241 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	PTPN12	Q05209	780 aa	Known RBP	10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	SREBF2	Q12772	1141 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	CCDC152	Q4G0S7	254 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	PRAMEF18	Q5VWM3	479 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	CCDC191	Q8NCU4	936 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	SCAF8	Q9UPN6	1271 aa	Known RBP	10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	MED23	Q9ULK4	1368 aa		10.84	□□□□□ -0.67
CKLF-208	ENST00000563092	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	PDE8A	O60658	829 aa		10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	MAP3K11	Q16584	847 aa		10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	RTL5	Q5HYW3	569 aa	Predicted RBP	10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	LCE2D	Q5TA82	110 aa	Predicted RBP	10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	SPRYD7	Q5W111	196 aa		10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	INTS3	Q68E01	1043 aa	Known RBP	10.83	□□□□□ -0.68
CKLF-208	ENST00000563092	MYO3B	Q8WXR4	1341 aa		10.83	□□□□□ -0.68
CKLF-208	ENST00000563092		G3V3G9	751 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	ALDH1A1	P00352	501 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	ZNF853	P0CG23	659 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	DCAF8	Q5TAQ9	597 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	STRIP1	Q5VSL9	837 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	DUSP27	Q5VZP5	1158 aa		10.82	□□□□□ -0.68
CKLF-208	ENST00000563092	COL1A1	P02452	1464 aa	Predicted RBP	10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	SEC24B	O95487	1268 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	INHBE	P58166	350 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	OTOP1	Q7RTM1	612 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	ANKRD18A	Q8IVF6	992 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	ARMC5	Q96C12	935 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	MXD3	Q9BW11	206 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	BSDC1	Q9NW68	430 aa	Predicted RBP	10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	MINPP1	Q9UNW1	487 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	COLQ	Q9Y215	455 aa	Predicted RBP	10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	SSC5D	A1L4H1	1573 aa		10.81	□□□□□ -0.68
CKLF-208	ENST00000563092	UNCX	A6NJT0	531 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	ZBTB48	P10074	688 aa	Predicted RBP	10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	NF2	P35240	595 aa		10.8	□□□□□ -0.68
CKLF-208	ENST00000563092	FXR1	P51114	621 aa	Known RBP eCLIP	10.8	□□□□□ -0.68

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