RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 POTECB2RU33 542 aa16.68■□□□□ 0.26
CDH1-204ENST00000562118 ECE2O60344 883 aa16.68■□□□□ 0.26
CDH1-204ENST00000562118 IL1R1P14778 569 aa16.68■□□□□ 0.26
CDH1-204ENST00000562118 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
CDH1-204ENST00000562118 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
CDH1-204ENST00000562118 SUPT16HQ9Y5B9 1047 aaKnown RBP16.68■□□□□ 0.26
CDH1-204ENST00000562118 SASH1O94885 1247 aa16.67■□□□□ 0.26
CDH1-204ENST00000562118 CXCL9Q07325 125 aa16.67■□□□□ 0.26
CDH1-204ENST00000562118 SIL1Q9H173 461 aa16.67■□□□□ 0.26
CDH1-204ENST00000562118 DBNDD1Q9H9R9 158 aa16.67■□□□□ 0.26
CDH1-204ENST00000562118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.67■□□□□ 0.26
CDH1-204ENST00000562118 KDM2BQ8NHM5 1336 aa16.67■□□□□ 0.26
CDH1-204ENST00000562118 FBXO33Q7Z6M2 555 aa16.66■□□□□ 0.26
CDH1-204ENST00000562118 LPIN2Q92539 896 aa16.66■□□□□ 0.26
CDH1-204ENST00000562118 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
CDH1-204ENST00000562118 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
CDH1-204ENST00000562118 RIMBP2O15034 1052 aa16.65■□□□□ 0.26
CDH1-204ENST00000562118 VIL1P09327 827 aaKnown RBP16.65■□□□□ 0.26
CDH1-204ENST00000562118 EIF6P56537 245 aaKnown RBP16.65■□□□□ 0.26
CDH1-204ENST00000562118 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
CDH1-204ENST00000562118 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
CDH1-204ENST00000562118 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
CDH1-204ENST00000562118 DDNO94850 711 aaPredicted RBP16.64■□□□□ 0.25
CDH1-204ENST00000562118 KCNJ4P48050 445 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 SCNN1DP51172 638 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 CIAPIN1Q6FI81 312 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
CDH1-204ENST00000562118 GMLQ99445 158 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 KCNQ5Q9NR82 932 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 AKAP11Q9UKA4 1901 aa16.64■□□□□ 0.25
CDH1-204ENST00000562118 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
CDH1-204ENST00000562118 KIF3CO14782 793 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 HMMRO75330 724 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 FKBP1AP62942 108 aaKnown RBP16.63■□□□□ 0.25
CDH1-204ENST00000562118 TFCP2Q12800 502 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 TNIP1Q15025 636 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 ATP2B3Q16720 1220 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 DPF2Q92785 391 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 FAM205AQ6ZU69 1335 aa16.63■□□□□ 0.25
CDH1-204ENST00000562118 PSMD14O00487 310 aa16.62■□□□□ 0.25
CDH1-204ENST00000562118 SURF6O75683 361 aaKnown RBP16.62■□□□□ 0.25
CDH1-204ENST00000562118 SLC5A1P13866 664 aa16.62■□□□□ 0.25
CDH1-204ENST00000562118 RPS12P25398 132 aaKnown RBP16.62■□□□□ 0.25
CDH1-204ENST00000562118 G3BP1Q13283 466 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDH1-204ENST00000562118 DACT2Q5SW24 774 aa16.62■□□□□ 0.25
CDH1-204ENST00000562118 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
CDH1-204ENST00000562118 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
CDH1-204ENST00000562118 RAD17O75943 681 aa16.61■□□□□ 0.25
CDH1-204ENST00000562118 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
CDH1-204ENST00000562118 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
CDH1-204ENST00000562118 GYG1P46976 350 aa16.61■□□□□ 0.25
CDH1-204ENST00000562118 HSP90AB4PQ58FF6 505 aa16.61■□□□□ 0.25
CDH1-204ENST00000562118 GPBP1L1Q9HC44 474 aaPredicted RBP16.61■□□□□ 0.25
CDH1-204ENST00000562118 NMRK2Q9NPI5 230 aa16.61■□□□□ 0.25
CDH1-204ENST00000562118 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
CDH1-204ENST00000562118 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
CDH1-204ENST00000562118 A0A1B0GUL7 405 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
CDH1-204ENST00000562118 RSBN1LQ6PCB5 846 aaPredicted RBP16.6■□□□□ 0.25
CDH1-204ENST00000562118 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 ERC1Q8IUD2 1116 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 AGBL3Q8NEM8 1001 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
CDH1-204ENST00000562118 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 VEGFAP15692 232 aaPredicted RBP16.59■□□□□ 0.25
CDH1-204ENST00000562118 MMP14P50281 582 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 EXOC6Q8TAG9 804 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
CDH1-204ENST00000562118 SEMA3EO15041 775 aa16.58■□□□□ 0.24
CDH1-204ENST00000562118 ADORA1P30542 326 aa16.58■□□□□ 0.24
CDH1-204ENST00000562118 GMPSP49915 693 aaPredicted RBP16.58■□□□□ 0.24
CDH1-204ENST00000562118 BCAMP50895 628 aa16.58■□□□□ 0.24
CDH1-204ENST00000562118 ZNF280AP59817 542 aaPredicted RBP16.58■□□□□ 0.24
CDH1-204ENST00000562118 CAVIN4Q5BKX8 364 aa16.58■□□□□ 0.24
CDH1-204ENST00000562118 RHPN1Q8TCX5 695 aa16.58■□□□□ 0.24
CDH1-204ENST00000562118 TAF1DQ9H5J8 278 aaPredicted RBP16.58■□□□□ 0.24
CDH1-204ENST00000562118 DOCK2Q92608 1830 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 TIMM10P62072 90 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 CERS5Q8N5B7 392 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 ZNF512BQ96KM6 892 aaPredicted RBP16.57■□□□□ 0.24
CDH1-204ENST00000562118 RRAGCQ9HB90 399 aa16.57■□□□□ 0.24
CDH1-204ENST00000562118 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
CDH1-204ENST00000562118 PHKA1P46020 1223 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
CDH1-204ENST00000562118 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
CDH1-204ENST00000562118 HACL1Q9UJ83 578 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms