RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 REM2Q8IYK8 340 aaPredicted RBP9.25□□□□□ -0.93
TPM1-231ENST00000561395 GPC2Q8N158 579 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 RHPN1Q8TCX5 695 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 C7orf43Q8WVR3 580 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 JARID2Q92833 1246 aaPredicted RBP9.25□□□□□ -0.93
TPM1-231ENST00000561395 KIF1BPQ96EK5 621 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 OSBPL3Q9H4L5 887 aa9.25□□□□□ -0.93
TPM1-231ENST00000561395 FZD9O00144 591 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 CAMTA2O94983 1202 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 PCCAP05165 728 aaPredicted RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 GSPT1P15170 499 aaKnown RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 RFX5P48382 616 aaPredicted RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 PDE1AP54750 535 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 TTC22Q5TAA0 569 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 PA2G4Q9UQ80 394 aaKnown RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 DDX60Q8IY21 1712 aaKnown RBP9.24□□□□□ -0.93
TPM1-231ENST00000561395 AOX1Q06278 1338 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 UBN2Q6ZU65 1347 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 CDHR2Q9BYE9 1310 aa9.24□□□□□ -0.93
TPM1-231ENST00000561395 SNED1Q8TER0 1413 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 AK9Q5TCS8 1911 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 MX1P20591 662 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 GPTP24298 496 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
TPM1-231ENST00000561395 OS9Q13438 667 aaPredicted RBP9.23□□□□□ -0.93
TPM1-231ENST00000561395 LMBR1LQ6UX01 489 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 ZNF34Q8IZ26 560 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
TPM1-231ENST00000561395 PLA2G12BQ9BX93 195 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 COPRSQ9NQ92 184 aa9.23□□□□□ -0.93
TPM1-231ENST00000561395 RGL2O15211 777 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 SEC24BO95487 1268 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 PTPN12Q05209 780 aaKnown RBP9.22□□□□□ -0.93
TPM1-231ENST00000561395 G3BP1Q13283 466 aaKnown RBP eCLIP9.22□□□□□ -0.93
TPM1-231ENST00000561395 RTL5Q5HYW3 569 aaPredicted RBP9.22□□□□□ -0.93
TPM1-231ENST00000561395 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 SAPCD2Q86UD0 394 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 SETDB2Q96T68 719 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
TPM1-231ENST00000561395 CDC45O75419 566 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 NPR1P16066 1061 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 ANP32AP39687 249 aaKnown RBP9.21□□□□□ -0.94
TPM1-231ENST00000561395 EPS15P42566 896 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 SCNN1DP51172 638 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 EIF6P56537 245 aaKnown RBP9.21□□□□□ -0.94
TPM1-231ENST00000561395 PARP10Q53GL7 1025 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 RTKN2Q8IZC4 609 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 SYNE4Q8N205 404 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 PLCD3Q8N3E9 789 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
TPM1-231ENST00000561395 KLHDC4Q8TBB5 520 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 FAM89AQ96GI7 184 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 ZNF652Q9Y2D9 606 aa9.21□□□□□ -0.94
TPM1-231ENST00000561395 SASH1O94885 1247 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 CELF2O95319 508 aaKnown RBP9.2□□□□□ -0.94
TPM1-231ENST00000561395 CSF1RP07333 972 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 SDSP20132 328 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 CLEC4GQ6UXB4 293 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 TBC1D9Q6ZT07 1266 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 USP50Q70EL3 339 aaPredicted RBP9.2□□□□□ -0.94
TPM1-231ENST00000561395 NUTM1Q86Y26 1132 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 CLASRPQ8N2M8 674 aaKnown RBP9.2□□□□□ -0.94
TPM1-231ENST00000561395 JDP2Q8WYK2 163 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 HHIPL1Q96JK4 782 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 SIL1Q9H173 461 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 TRMT112Q9UI30 125 aaKnown RBP9.2□□□□□ -0.94
TPM1-231ENST00000561395 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
TPM1-231ENST00000561395 RBBP6Q7Z6E9 1792 aaKnown RBP9.19□□□□□ -0.94
TPM1-231ENST00000561395 IRS4O14654 1257 aaPredicted RBP9.19□□□□□ -0.94
TPM1-231ENST00000561395 CTSWP56202 376 aa9.19□□□□□ -0.94
TPM1-231ENST00000561395 PI4K2BQ8TCG2 481 aa9.19□□□□□ -0.94
TPM1-231ENST00000561395 UPF2Q9HAU5 1272 aaKnown RBP9.19□□□□□ -0.94
TPM1-231ENST00000561395 TTC41PQ6P2S7 1318 aa9.19□□□□□ -0.94
TPM1-231ENST00000561395 SPEF2Q9C093 1822 aa9.19□□□□□ -0.94
TPM1-231ENST00000561395 ZNF609O15014 1411 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 PDE8AO60658 829 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 CIAO1O76071 339 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 NTSR2O95665 410 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
TPM1-231ENST00000561395 NOGQ13253 232 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 CCDC57Q2TAC2 916 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 SUSD4Q5VX71 490 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 AACSQ86V21 672 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
TPM1-231ENST00000561395 SH3TC1Q8TE82 1336 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 EAF2Q96CJ1 260 aaPredicted RBP9.18□□□□□ -0.94
TPM1-231ENST00000561395 GPATCH3Q96I76 525 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 PSMD1Q99460 953 aa9.18□□□□□ -0.94
TPM1-231ENST00000561395 UTP14AQ9BVJ6 771 aaKnown RBP9.18□□□□□ -0.94
TPM1-231ENST00000561395 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms