RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 C6orf229H3BNL8 230 aa19.15■□□□□ 0.66
AP4E1-205ENST00000561393 PUM3Q15397 648 aaKnown RBP19.15■□□□□ 0.66
AP4E1-205ENST00000561393 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
AP4E1-205ENST00000561393 KLHL34Q8N239 644 aa19.15■□□□□ 0.66
AP4E1-205ENST00000561393 HAUS7Q99871 368 aa19.15■□□□□ 0.66
AP4E1-205ENST00000561393 UBE2HP62256 183 aa19.14■□□□□ 0.65
AP4E1-205ENST00000561393 CRKLP46109 303 aaKnown RBP19.14■□□□□ 0.65
AP4E1-205ENST00000561393 H7C1W4 665 aa19.14■□□□□ 0.65
AP4E1-205ENST00000561393 GPAA1O43292 621 aa19.14■□□□□ 0.65
AP4E1-205ENST00000561393 HLFQ16534 295 aa19.14■□□□□ 0.65
AP4E1-205ENST00000561393 ZNF589Q86UQ0 364 aaPredicted RBP19.14■□□□□ 0.65
AP4E1-205ENST00000561393 METAP2P50579 478 aaKnown RBP eCLIP19.13■□□□□ 0.65
AP4E1-205ENST00000561393 ATP2B2Q01814 1243 aa19.13■□□□□ 0.65
AP4E1-205ENST00000561393 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
AP4E1-205ENST00000561393 JMYQ8N9B5 988 aa19.13■□□□□ 0.65
AP4E1-205ENST00000561393 APPBP2Q92624 585 aa19.13■□□□□ 0.65
AP4E1-205ENST00000561393 TPD52L1Q16890 204 aaPredicted RBP19.13■□□□□ 0.65
AP4E1-205ENST00000561393 PES1O00541 588 aaKnown RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 RXRAP19793 462 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 RNF41Q9H4P4 317 aaPredicted RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 EPB41L2O43491 1005 aaKnown RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 GIMAP6Q6P9H5 292 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 NLRP10Q86W26 655 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 MBD4O95243 580 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 IL6STP40189 918 aaPredicted RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 MST1RQ04912 1400 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 PDIA6Q15084 440 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 ME3Q16798 604 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 IQCA1Q86XH1 822 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 NCOA5Q9HCD5 579 aaKnown RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 CCDC39Q9UFE4 941 aa19.12■□□□□ 0.65
AP4E1-205ENST00000561393 HOOK1Q9UJC3 728 aaKnown RBP19.12■□□□□ 0.65
AP4E1-205ENST00000561393 ESPNB1AK53 854 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 LPIN2Q92539 896 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 KIF2CQ99661 725 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 ARID3AQ99856 593 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 IARSP41252 1262 aaKnown RBP19.11■□□□□ 0.65
AP4E1-205ENST00000561393 TTLL5Q6EMB2 1281 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
AP4E1-205ENST00000561393 NAA16Q6N069 864 aaPredicted RBP19.11■□□□□ 0.65
AP4E1-205ENST00000561393 MAP4K1Q92918 833 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 TM6SF1Q9BZW5 370 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 MKNK2Q9HBH9 465 aa19.11■□□□□ 0.65
AP4E1-205ENST00000561393 PI16Q6UXB8 463 aa19.1■□□□□ 0.65
AP4E1-205ENST00000561393 CDK11BP21127 795 aaKnown RBP19.1■□□□□ 0.65
AP4E1-205ENST00000561393 NRXN3Q9Y4C0 1643 aa19.1■□□□□ 0.65
AP4E1-205ENST00000561393 PXDNQ92626 1479 aa19.1■□□□□ 0.65
AP4E1-205ENST00000561393 PTPDC1A2A3K4 754 aa19.1■□□□□ 0.65
AP4E1-205ENST00000561393 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
AP4E1-205ENST00000561393 NAT10Q9H0A0 1025 aaKnown RBP19.09■□□□□ 0.65
AP4E1-205ENST00000561393 NSFL1CQ9UNZ2 370 aaKnown RBP19.09■□□□□ 0.65
AP4E1-205ENST00000561393 SOS2Q07890 1332 aaPredicted RBP19.09■□□□□ 0.65
AP4E1-205ENST00000561393 ZBTB43O43298 467 aa19.09■□□□□ 0.65
AP4E1-205ENST00000561393 RBM5P52756 815 aaKnown RBP eCLIP19.09■□□□□ 0.65
AP4E1-205ENST00000561393 SLC26A6Q9BXS9 759 aa19.09■□□□□ 0.65
AP4E1-205ENST00000561393 USP25Q9UHP3 1055 aa19.09■□□□□ 0.65
AP4E1-205ENST00000561393 BRD1O95696 1058 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 SLFNL1Q499Z3 407 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 VSIG10Q8N0Z9 540 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 ARMT1Q9H993 441 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 ZSWIM6Q9HCJ5 1215 aa19.08■□□□□ 0.65
AP4E1-205ENST00000561393 CCDC196A0A1B0GTZ2 297 aa19.08■□□□□ 0.64
AP4E1-205ENST00000561393 JAK2O60674 1132 aa19.08■□□□□ 0.64
AP4E1-205ENST00000561393 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.64
AP4E1-205ENST00000561393 B4E1Z4 1266 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 CCDC102BQ68D86 513 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 WASF1Q92558 559 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 SEC31BQ9NQW1 1179 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 LMBRD1Q9NUN5 540 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 ZNF532Q9HCE3 1301 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 HSPD1P10809 573 aaKnown RBP19.07■□□□□ 0.64
AP4E1-205ENST00000561393 PHKA1P46020 1223 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 LRSAM1Q6UWE0 723 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 WTAPQ15007 396 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 FSIP1Q8NA03 581 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 ZKSCAN3Q9BRR0 538 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 ZSCAN16Q9H4T2 348 aaPredicted RBP19.07■□□□□ 0.64
AP4E1-205ENST00000561393 MEGF6O75095 1541 aa19.07■□□□□ 0.64
AP4E1-205ENST00000561393 PDE8BO95263 885 aa19.06■□□□□ 0.64
AP4E1-205ENST00000561393 SSRP1Q08945 709 aaKnown RBP19.06■□□□□ 0.64
AP4E1-205ENST00000561393 CTCFLQ8NI51 663 aaPredicted RBP19.06■□□□□ 0.64
AP4E1-205ENST00000561393 PPP1R1BQ9UD71 204 aaPredicted RBP19.06■□□□□ 0.64
AP4E1-205ENST00000561393 SPATA5Q8NB90 893 aa19.06■□□□□ 0.64
AP4E1-205ENST00000561393 RGS12O14924 1447 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 TSPY2A6NKD2 308 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 E7EWF7 191 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 IKQ13123 557 aaPredicted RBP19.05■□□□□ 0.64
AP4E1-205ENST00000561393 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 ALG1Q9BT22 464 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 DACT1Q9NYF0 836 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 MROH5Q6ZUA9 1318 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 CYP21A2P08686 494 aa19.05■□□□□ 0.64
AP4E1-205ENST00000561393 ZSCAN29Q8IWY8 852 aaPredicted RBP19.05■□□□□ 0.64
AP4E1-205ENST00000561393 BCL11BQ9C0K0 894 aaPredicted RBP19.05■□□□□ 0.64
AP4E1-205ENST00000561393 SNAP23O00161 211 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms