RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-215ENST00000561367 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 HMMRO75330 724 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 GRAPQ13588 217 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 CCDC24Q8N4L8 307 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 GRAPLQ8TC17 118 aaPredicted RBP12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 JARID2Q92833 1246 aaPredicted RBP12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 TMX4Q9H1E5 349 aaPredicted RBP12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
KNSTRN-215ENST00000561367 DLEC1Q9Y238 1755 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 MYH3P11055 1940 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 DPEP1P16444 411 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 ITGA6P23229 1130 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
KNSTRN-215ENST00000561367 A0A0G2JLW4 131 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 KCNA3P22001 575 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 CHRNA5P30532 468 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 RPS8P62241 208 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 ATP8B2P98198 1209 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 DALRD3Q5D0E6 543 aaKnown RBP12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.443e-7■□□□□ 8.4
KNSTRN-215ENST00000561367 GREM2Q9H772 168 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 CHMP3Q9Y3E7 222 aa12.32□□□□□ -0.44
KNSTRN-215ENST00000561367 KIAA1551Q9HCM1 1747 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 SRGAP3O43295 1099 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 PDE4AP27815 886 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 TAF7LQ5H9L4 462 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 SSH3Q8TE77 659 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 MPHOSPH8Q99549 860 aa12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 LARP6Q9BRS8 491 aaKnown RBP12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 BSDC1Q9NW68 430 aaPredicted RBP12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 COL11A2P13942 1736 aaPredicted RBP12.31□□□□□ -0.44
KNSTRN-215ENST00000561367 MFSD10Q14728 455 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 HSP90AB4PQ58FF6 505 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 PRPF40BQ6NWY9 871 aaKnown RBP12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 SP8Q8IXZ3 490 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 NLGN2Q8NFZ4 835 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 COPRSQ9NQ92 184 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
KNSTRN-215ENST00000561367 PPEF1O14829 653 aaPredicted RBP12.29□□□□□ -0.44
KNSTRN-215ENST00000561367 CIAO1O76071 339 aa12.29□□□□□ -0.44
KNSTRN-215ENST00000561367 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
KNSTRN-215ENST00000561367 SEC31BQ9NQW1 1179 aa12.29□□□□□ -0.44
KNSTRN-215ENST00000561367 RFX5P48382 616 aaPredicted RBP12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 PTPN12Q05209 780 aaKnown RBP12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 RTKN2Q8IZC4 609 aa12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 ANKRD2Q9GZV1 360 aa12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 MROH5Q6ZUA9 1318 aa12.28□□□□□ -0.44
KNSTRN-215ENST00000561367 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
KNSTRN-215ENST00000561367 PNMA6EA0A0J9YXQ4 647 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 EYA2O00167 538 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 GRIN3BO60391 1043 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 IL15P40933 162 aaPredicted RBP12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 CCDC93Q567U6 631 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 ERC1Q8IUD2 1116 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 C7orf43Q8WVR3 580 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 DDX27Q96GQ7 796 aaKnown RBP12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 C1orf115Q9H7X2 142 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 CNNM1Q9NRU3 951 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 PODXL2Q9NZ53 605 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
KNSTRN-215ENST00000561367 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 SUPT20HQ8NEM7 779 aa12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 RWDD1Q9H446 243 aaPredicted RBP12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 XDHP47989 1333 aa12.26□□□□□ -0.45
KNSTRN-215ENST00000561367 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 RAB11FIP3O75154 756 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 PSMD1Q99460 953 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 LEMD3Q9Y2U8 911 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 LTBP3Q9NS15 1303 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
KNSTRN-215ENST00000561367 C21orf2O43822 256 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 SURF6O75683 361 aaKnown RBP12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 SIRT2Q8IXJ6 389 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 MPNDQ8N594 471 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 RTFDC1Q9BY42 306 aaPredicted RBP12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
KNSTRN-215ENST00000561367 SNED1Q8TER0 1413 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms