RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 AKAP11Q9UKA4 1901 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 SNAP23O00161 211 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 SASH1O94885 1247 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 KCNJ4P48050 445 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 CXCL9Q07325 125 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 PUM3Q15397 648 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 GPR101Q96P66 508 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 SIL1Q9H173 461 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-221ENST00000561055 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 ECE2O60344 883 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 SURF6O75683 361 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 HSP90AB4PQ58FF6 505 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 FBXO33Q7Z6M2 555 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 GPC2Q8N158 579 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 LPIN2Q92539 896 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 CD209Q9NNX6 404 aa11.93□□□□□ -0.5
RABGGTA-221ENST00000561055 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 IFIT1P09914 478 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 IL1R1P14778 569 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 KLRK1P26718 216 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 TNIP1Q15025 636 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 FAM84BQ96KN1 310 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 DBNDD1Q9H9R9 158 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 AKAP2Q9Y2D5 859 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
RABGGTA-221ENST00000561055 POTECB2RU33 542 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 VIL1P09327 827 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 SLC5A1P13866 664 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 TFCP2Q12800 502 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 ATP2B3Q16720 1220 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 CIAPIN1Q6FI81 312 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 ERC1Q8IUD2 1116 aa11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 TDRD7Q8NHU6 1098 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 MYO5AQ9Y4I1 1855 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-221ENST00000561055 G3V3G9 751 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 RAB11FIP3O75154 756 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 HIBADHP31937 336 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 STRIP1Q5VSL9 837 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 DPF2Q92785 391 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 KCNQ5Q9NR82 932 aa11.9□□□□□ -0.5
RABGGTA-221ENST00000561055 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.51
RABGGTA-221ENST00000561055 FAM205AQ6ZU69 1335 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 A0A1B0GUL7 405 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 USP17L3A6NCW0 530 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 USP17L4A6NCW7 530 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 PSMD14O00487 310 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 VEGFAP15692 232 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 RPS12P25398 132 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 GYG1P46976 350 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 MMP14P50281 582 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 TIMM10P62072 90 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 HDAC1Q13547 482 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 USP17L1Q7RTZ2 530 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 EXOC6Q8TAG9 804 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 GMLQ99445 158 aa11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 GPBP1L1Q9HC44 474 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-221ENST00000561055 RAD17O75943 681 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 BCAMP50895 628 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 SCNN1DP51172 638 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 OS9Q13438 667 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 TNNI3KQ59H18 835 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 DACT2Q5SW24 774 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 TTLL5Q6EMB2 1281 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 RHPN1Q8TCX5 695 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 GPRC5DQ9NZD1 345 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 EXOC6BQ9Y2D4 811 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 FPGT-TNNI3KV9GXZ4 949 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 MYH2Q9UKX2 1941 aa11.88□□□□□ -0.51
RABGGTA-221ENST00000561055 MYO3BQ8WXR4 1341 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 IQCA1LA6NCM1 817 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 SEMA3EO15041 775 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 RSBN1LQ6PCB5 846 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 EAF2Q96CJ1 260 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 RRAGCQ9HB90 399 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 NMRK2Q9NPI5 230 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 DOCK2Q92608 1830 aa11.87□□□□□ -0.51
RABGGTA-221ENST00000561055 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 MYH7P12883 1935 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 KIF3CO14782 793 aa11.86□□□□□ -0.51
RABGGTA-221ENST00000561055 GMPSP49915 693 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms