RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 AGBL3Q8NEM8 1001 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 PHAXQ9H814 394 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 MYOZ2Q9NPC6 264 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 XDHP47989 1333 aa13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 MYBBP1AQ9BQG0 1328 aaKnown RBP13.56□□□□□ -0.24
CDC42BPB-207ENST00000560492 USP17L3A6NCW0 530 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 USP17L4A6NCW7 530 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 PDE8AO60658 829 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 NF2P35240 595 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 MOB2Q70IA6 237 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 USP17L1Q7RTZ2 530 aa13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
CDC42BPB-207ENST00000560492 UBE2Q2LH0YL09 131 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 TBC1D8O95759 1140 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 FKBP1BP68106 108 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 TRIM28Q13263 835 aaKnown RBP13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 PRAMEF18Q5VWM3 479 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 OGFOD1Q8N543 542 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 MBIPQ9NS73 344 aa13.54□□□□□ -0.24
CDC42BPB-207ENST00000560492 PCCAP05165 728 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 PRKG1Q13976 671 aa13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 CCDC191Q8NCU4 936 aa13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 PCDH10Q9P2E7 1040 aa13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
CDC42BPB-207ENST00000560492 DDX10Q13206 875 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-207ENST00000560492 PODNQ7Z5L7 613 aa13.52□□□□□ -0.25
CDC42BPB-207ENST00000560492 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.25
CDC42BPB-207ENST00000560492 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CDC42BPB-207ENST00000560492 ZNF296Q8WUU4 475 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-207ENST00000560492 MXD3Q9BW11 206 aa13.51□□□□□ -0.25
CDC42BPB-207ENST00000560492 ZNF609O15014 1411 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 SASH1O94885 1247 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 CTSWP56202 376 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 GNAI1P63096 354 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 CALD1Q05682 793 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 NEXNQ0ZGT2 675 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 PKN2Q16513 984 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
CDC42BPB-207ENST00000560492 MED23Q9ULK4 1368 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 SREBF2Q12772 1141 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 GMLQ99445 158 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 IFT57Q9NWB7 429 aa13.49□□□□□ -0.25
CDC42BPB-207ENST00000560492 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 GPR25O00155 361 aa13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 KCNJ4P48050 445 aa13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 CCT4P50991 539 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 CHMP4AQ9BY43 222 aa13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 GREM2Q9H772 168 aa13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 ZNF646O15015 1829 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-207ENST00000560492 WTIPA6NIX2 430 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 WNT10BO00744 389 aa13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 APAF1O14727 1248 aa13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 MINPP1Q9UNW1 487 aa13.47□□□□□ -0.25
CDC42BPB-207ENST00000560492 ECM29Q5VYK3 1845 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 FKTNO75072 461 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 GABBR2O75899 941 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 FBXO46Q6PJ61 603 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 UBE3BQ7Z3V4 1068 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 MPHOSPH8Q99549 860 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 COA1Q9GZY4 146 aa13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-207ENST00000560492 PI4KAP2A4QPH2 592 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 TM4SF4P48230 202 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 GTF2IP78347 998 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 CWF19L2Q2TBE0 894 aaKnown RBP13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 STRIP1Q5VSL9 837 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 PI4KAP1Q8N8J0 262 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
CDC42BPB-207ENST00000560492 ZNF804BA4D1E1 1349 aa13.44□□□□□ -0.26
CDC42BPB-207ENST00000560492 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CDC42BPB-207ENST00000560492 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
CDC42BPB-207ENST00000560492 FZD1Q9UP38 647 aa13.44□□□□□ -0.26
CDC42BPB-207ENST00000560492 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
CDC42BPB-207ENST00000560492 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
CDC42BPB-207ENST00000560492 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms