RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RPS12P25398 132 aaKnown RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 HOXA10P31260 410 aaPredicted RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 IL6STP40189 918 aaPredicted RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 PTPN12Q05209 780 aaKnown RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
HERC1-208ENST00000560462 U2AF1L4Q8WU68 220 aaKnown RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 RTFDC1Q9BY42 306 aaPredicted RBP8.97□□□□□ -0.97
HERC1-208ENST00000560462 RNF208Q9H0X6 261 aa8.97□□□□□ -0.97
HERC1-208ENST00000560462 CDH23Q9H251 3354 aa8.96□□□□□ -0.97
HERC1-208ENST00000560462 FAM177BA6PVY3 158 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 HAX1O00165 279 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 PSMD14O00487 310 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 FYB1O15117 783 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
HERC1-208ENST00000560462 SYN1P17600 705 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 NF2P35240 595 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 AMOTQ4VCS5 1084 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 GPIHBP1Q8IV16 184 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 ATXN2LQ8WWM7 1075 aaKnown RBP8.96□□□□□ -0.98
HERC1-208ENST00000560462 SEMA6BQ9H3T3 888 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 CACNA1GO43497 2377 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 KIF7Q2M1P5 1343 aa8.96□□□□□ -0.98
HERC1-208ENST00000560462 NCOR1O75376 2440 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 TMEM31Q5JXX7 168 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 PRAMEF18Q5VWM3 479 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 DPP8Q6V1X1 898 aaPredicted RBP8.95□□□□□ -0.98
HERC1-208ENST00000560462 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
HERC1-208ENST00000560462 COL26A1Q96A83 441 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 ASB2Q96Q27 587 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 SLC52A2Q9HAB3 445 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 ZNF652Q9Y2D9 606 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
HERC1-208ENST00000560462 ZBTB48P10074 688 aaPredicted RBP8.94□□□□□ -0.98
HERC1-208ENST00000560462 PRMT2P55345 433 aa8.94□□□□□ -0.98
HERC1-208ENST00000560462 SCARF1Q14162 830 aa8.94□□□□□ -0.98
HERC1-208ENST00000560462 ARMC9Q7Z3E5 817 aa8.94□□□□□ -0.98
HERC1-208ENST00000560462 IL27Q8NEV9 243 aa8.94□□□□□ -0.98
HERC1-208ENST00000560462 CRAMP1Q96RY5 1269 aa8.94□□□□□ -0.98
HERC1-208ENST00000560462 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
HERC1-208ENST00000560462 COL2A1P02458 1487 aaPredicted RBP8.94□□□□□ -0.98
HERC1-208ENST00000560462 SGPL1O95470 568 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 GNRH1P01148 92 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 KIF22Q14807 665 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
HERC1-208ENST00000560462 USP38Q8NB14 1042 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 RBM17Q96I25 401 aaKnown RBP8.93□□□□□ -0.98
HERC1-208ENST00000560462 ZNF496Q96IT1 587 aaPredicted RBP8.93□□□□□ -0.98
HERC1-208ENST00000560462 ZMYND15Q9H091 742 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
HERC1-208ENST00000560462 ATP6V0A2Q9Y487 856 aa8.93□□□□□ -0.98
HERC1-208ENST00000560462 FAM205AQ6ZU69 1335 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 GRK4P32298 578 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 PRKG1Q13976 671 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 LDLRAD1Q5T700 205 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 SLC10A4Q96EP9 437 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 KDM4CQ9H3R0 1056 aa8.92□□□□□ -0.98
HERC1-208ENST00000560462 BIN2Q9UBW5 565 aaPredicted RBP8.92□□□□□ -0.98
HERC1-208ENST00000560462 SSC5DA1L4H1 1573 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 ABCC12Q96J65 1359 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 TFRCP02786 760 aaKnown RBP8.91□□□□□ -0.98
HERC1-208ENST00000560462 CAPN2P17655 700 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
HERC1-208ENST00000560462 UBXN2AP68543 259 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 PAWRQ96IZ0 340 aaKnown RBP8.91□□□□□ -0.98
HERC1-208ENST00000560462 ARHGAP39Q9C0H5 1083 aa8.91□□□□□ -0.98
HERC1-208ENST00000560462 MRPS5P82675 430 aaKnown RBP8.9□□□□□ -0.98
HERC1-208ENST00000560462 WNK4Q96J92 1243 aa8.9□□□□□ -0.98
HERC1-208ENST00000560462 PTPN18Q99952 460 aa8.9□□□□□ -0.98
HERC1-208ENST00000560462 TEX13AQ9BXU3 409 aaPredicted RBP8.9□□□□□ -0.98
HERC1-208ENST00000560462 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
HERC1-208ENST00000560462 THEGQ9P2T0 379 aa8.9□□□□□ -0.98
HERC1-208ENST00000560462 RIPOR2Q9Y4F9 1068 aa8.9□□□□□ -0.98
HERC1-208ENST00000560462 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 SPDYE16A6NNV3 312 aaPredicted RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 TRIM66O15016 1216 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 MLLT3P42568 568 aaPredicted RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 LACTBP83111 547 aaPredicted RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 NHLH1Q02575 133 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 EIF4A2Q14240 407 aaKnown RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 RAET1EQ8TD07 263 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 TRIM47Q96LD4 638 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 PUS7Q96PZ0 661 aaKnown RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 NYXQ9GZU5 481 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 TTYH1Q9H313 450 aaPredicted RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 EPHX3Q9H6B9 360 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 ZFYVE28Q9HCC9 887 aa8.89□□□□□ -0.99
HERC1-208ENST00000560462 ANGEL1Q9UNK9 670 aaKnown RBP8.89□□□□□ -0.99
HERC1-208ENST00000560462 BAHCC1Q9P281 2608 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 ALPK3Q96L96 1907 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 A1BGP04217 495 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 ZNF280AP59817 542 aaPredicted RBP8.88□□□□□ -0.99
HERC1-208ENST00000560462 GOLGA2Q08379 1002 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 PDE4DQ08499 809 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 TAF1CQ15572 869 aaPredicted RBP8.88□□□□□ -0.99
HERC1-208ENST00000560462 TTC5Q8N0Z6 440 aa8.88□□□□□ -0.99
HERC1-208ENST00000560462 SP7Q8TDD2 431 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms