RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 GOLGA2Q08379 1002 aa26.24■■□□□ 1.79
PSEN1-225ENST00000560005 DUSP27Q5VZP5 1158 aa26.24■■□□□ 1.79
PSEN1-225ENST00000560005 JARID2Q92833 1246 aaPredicted RBP26.24■■□□□ 1.79
PSEN1-225ENST00000560005 ATP2B4P23634 1241 aa26.23■■□□□ 1.79
PSEN1-225ENST00000560005 ANKRD18AQ8IVF6 992 aa26.23■■□□□ 1.79
PSEN1-225ENST00000560005 MYD88Q99836 296 aa26.23■■□□□ 1.79
PSEN1-225ENST00000560005 MKI67P46013 3256 aaKnown RBP26.22■■□□□ 1.79
PSEN1-225ENST00000560005 PDE8AO60658 829 aa26.22■■□□□ 1.79
PSEN1-225ENST00000560005 SREBF2Q12772 1141 aa26.22■■□□□ 1.79
PSEN1-225ENST00000560005 MXD3Q9BW11 206 aa26.22■■□□□ 1.79
PSEN1-225ENST00000560005 HTTP42858 3142 aa26.21■■□□□ 1.79
PSEN1-225ENST00000560005 WTIPA6NIX2 430 aaPredicted RBP26.21■■□□□ 1.79
PSEN1-225ENST00000560005 FKTNO75072 461 aa26.21■■□□□ 1.79
PSEN1-225ENST00000560005 PCCAP05165 728 aaPredicted RBP26.21■■□□□ 1.79
PSEN1-225ENST00000560005 NF2P35240 595 aa26.21■■□□□ 1.79
PSEN1-225ENST00000560005 CCDC27Q2M243 656 aa26.21■■□□□ 1.79
PSEN1-225ENST00000560005 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
PSEN1-225ENST00000560005 WNT10BO00744 389 aa26.2■■□□□ 1.78
PSEN1-225ENST00000560005 DACT2Q5SW24 774 aa26.2■■□□□ 1.78
PSEN1-225ENST00000560005 CCDC191Q8NCU4 936 aa26.2■■□□□ 1.78
PSEN1-225ENST00000560005 PHAXQ9H814 394 aaKnown RBP26.2■■□□□ 1.78
PSEN1-225ENST00000560005 SALL2Q9Y467 1007 aaPredicted RBP26.2■■□□□ 1.78
PSEN1-225ENST00000560005 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
PSEN1-225ENST00000560005 OGFOD1Q8N543 542 aa26.19■■□□□ 1.78
PSEN1-225ENST00000560005 FBXW7Q969H0 707 aa26.19■■□□□ 1.78
PSEN1-225ENST00000560005 GCC1Q96CN9 775 aa26.19■■□□□ 1.78
PSEN1-225ENST00000560005 SASH1O94885 1247 aa26.18■■□□□ 1.78
PSEN1-225ENST00000560005 PRKG1Q13976 671 aa26.18■■□□□ 1.78
PSEN1-225ENST00000560005 CFHR5Q9BXR6 569 aa26.18■■□□□ 1.78
PSEN1-225ENST00000560005 CWC25Q9NXE8 425 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-225ENST00000560005 MED23Q9ULK4 1368 aa26.18■■□□□ 1.78
PSEN1-225ENST00000560005 ZNF521Q96K83 1311 aa26.17■■□□□ 1.78
PSEN1-225ENST00000560005 MBIPQ9NS73 344 aa26.17■■□□□ 1.78
PSEN1-225ENST00000560005 CENPFP49454 3210 aa26.16■■□□□ 1.78
PSEN1-225ENST00000560005 ARMC9Q7Z3E5 817 aa26.16■■□□□ 1.78
PSEN1-225ENST00000560005 ZNF646O15015 1829 aaPredicted RBP26.16■■□□□ 1.78
PSEN1-225ENST00000560005 CDC5LQ99459 802 aaKnown RBP26.15■■□□□ 1.78
PSEN1-225ENST00000560005 MYO3BQ8WXR4 1341 aa26.14■■□□□ 1.78
PSEN1-225ENST00000560005 WDR63Q8IWG1 891 aa26.14■■□□□ 1.78
PSEN1-225ENST00000560005 MINPP1Q9UNW1 487 aa26.14■■□□□ 1.78
PSEN1-225ENST00000560005 CTSWP56202 376 aa26.13■■□□□ 1.77
PSEN1-225ENST00000560005 STRIP1Q5VSL9 837 aa26.13■■□□□ 1.77
PSEN1-225ENST00000560005 SPRYD7Q5W111 196 aa26.13■■□□□ 1.77
PSEN1-225ENST00000560005 ELL2O00472 640 aaPredicted RBP26.12■■□□□ 1.77
PSEN1-225ENST00000560005 CCT4P50991 539 aaKnown RBP26.12■■□□□ 1.77
PSEN1-225ENST00000560005 LDLRAD1Q5T700 205 aa26.12■■□□□ 1.77
PSEN1-225ENST00000560005 APOBEC3FQ8IUX4 373 aaKnown RBP26.12■■□□□ 1.77
PSEN1-225ENST00000560005 ANGEL1Q9UNK9 670 aaKnown RBP26.12■■□□□ 1.77
PSEN1-225ENST00000560005 TRIM17Q9Y577 477 aa26.12■■□□□ 1.77
PSEN1-225ENST00000560005 SPEF2Q9C093 1822 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 E9PSI1 815 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 ALDH1A1P00352 501 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 HABP4Q5JVS0 413 aaKnown RBP26.11■■□□□ 1.77
PSEN1-225ENST00000560005 WWC1Q8IX03 1113 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 METTL22Q9BUU2 404 aaPredicted RBP26.11■■□□□ 1.77
PSEN1-225ENST00000560005 COA1Q9GZY4 146 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 BSDC1Q9NW68 430 aaPredicted RBP26.11■■□□□ 1.77
PSEN1-225ENST00000560005 FZD1Q9UP38 647 aa26.11■■□□□ 1.77
PSEN1-225ENST00000560005 POTEFA5A3E0 1075 aa26.1■■□□□ 1.77
PSEN1-225ENST00000560005 TXNRD3Q86VQ6 643 aa26.1■■□□□ 1.77
PSEN1-225ENST00000560005 GREM2Q9H772 168 aa26.1■■□□□ 1.77
PSEN1-225ENST00000560005 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.1■■□□□ 1.77
PSEN1-225ENST00000560005 BRCA2P51587 3418 aa26.1■■□□□ 1.77
PSEN1-225ENST00000560005 OTOP1Q7RTM1 612 aa26.09■■□□□ 1.77
PSEN1-225ENST00000560005 KIAA0825Q8IV33 1275 aa26.09■■□□□ 1.77
PSEN1-225ENST00000560005 TTLL11Q8NHH1 800 aa26.09■■□□□ 1.77
PSEN1-225ENST00000560005 DDX58O95786 925 aaKnown RBP26.08■■□□□ 1.77
PSEN1-225ENST00000560005 ZNF853P0CG23 659 aa26.08■■□□□ 1.77
PSEN1-225ENST00000560005 MMP14P50281 582 aa26.08■■□□□ 1.77
PSEN1-225ENST00000560005 IFNL1Q8IU54 200 aa26.08■■□□□ 1.77
PSEN1-225ENST00000560005 MANSC4A6NHS7 340 aaPredicted RBP26.07■■□□□ 1.76
PSEN1-225ENST00000560005 NEFLP07196 543 aa26.07■■□□□ 1.76
PSEN1-225ENST00000560005 SLFN5Q08AF3 891 aa26.07■■□□□ 1.76
PSEN1-225ENST00000560005 INTS3Q68E01 1043 aaKnown RBP26.07■■□□□ 1.76
PSEN1-225ENST00000560005 TTLL5Q6EMB2 1281 aa26.07■■□□□ 1.76
PSEN1-225ENST00000560005 MAP3K2Q9Y2U5 619 aa26.07■■□□□ 1.76
PSEN1-225ENST00000560005 INHBEP58166 350 aa26.06■■□□□ 1.76
PSEN1-225ENST00000560005 CALD1Q05682 793 aaKnown RBP26.06■■□□□ 1.76
PSEN1-225ENST00000560005 SLC10A4Q96EP9 437 aa26.06■■□□□ 1.76
PSEN1-225ENST00000560005 ZBED3Q96IU2 234 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-225ENST00000560005 KIAA0100Q14667 2235 aaKnown RBP26.05■■□□□ 1.76
PSEN1-225ENST00000560005 KLRK1P26718 216 aa26.05■■□□□ 1.76
PSEN1-225ENST00000560005 DEFB129Q9H1M3 183 aa26.05■■□□□ 1.76
PSEN1-225ENST00000560005 LEMD3Q9Y2U8 911 aa26.05■■□□□ 1.76
PSEN1-225ENST00000560005 GTF3C3Q9Y5Q9 886 aa26.05■■□□□ 1.76
PSEN1-225ENST00000560005 MYH3P11055 1940 aa26.05■■□□□ 1.76
PSEN1-225ENST00000560005 IGF2BP3O00425 579 aaKnown RBP eCLIP26.04■■□□□ 1.76
PSEN1-225ENST00000560005 IGKV5-2P06315 115 aa26.04■■□□□ 1.76
PSEN1-225ENST00000560005 GTF2IP78347 998 aa26.04■■□□□ 1.76
PSEN1-225ENST00000560005 CLMNQ96JQ2 1002 aa26.04■■□□□ 1.76
PSEN1-225ENST00000560005 COL1A1P02452 1464 aaPredicted RBP26.04■■□□□ 1.76
PSEN1-225ENST00000560005 ZBTB48P10074 688 aaPredicted RBP26.03■■□□□ 1.76
PSEN1-225ENST00000560005 TRMT2AQ8IZ69 625 aaKnown RBP26.03■■□□□ 1.76
PSEN1-225ENST00000560005 C8orf58Q8NAV2 365 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 CDCA7LQ96GN5 454 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 WNK4Q96J92 1243 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 IFT57Q9NWB7 429 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 ZNF804BA4D1E1 1349 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 IL16Q14005 1332 aa26.03■■□□□ 1.76
PSEN1-225ENST00000560005 MAP3K11Q16584 847 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms