RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 EPHX2P34913 555 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
CHRNB4-204ENST00000559849 SCN9AQ15858 1988 aa17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 CIAO1O76071 339 aa17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 VIL1P09327 827 aaKnown RBP17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 GMPSP49915 693 aaPredicted RBP17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 PNMA8AQ86V59 439 aaPredicted RBP17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 DPF2Q92785 391 aa17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 GPRC5DQ9NZD1 345 aa17.02■□□□□ 0.32
CHRNB4-204ENST00000559849 EPS15P42566 896 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 SIL1Q9H173 461 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 IRS2Q9Y4H2 1338 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 ATG9AQ7Z3C6 839 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
CHRNB4-204ENST00000559849 USP17L3A6NCW0 530 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 USP17L4A6NCW7 530 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
CHRNB4-204ENST00000559849 FSTL1Q12841 308 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 CD209Q9NNX6 404 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 PA2G4Q9UQ80 394 aaKnown RBP17■□□□□ 0.31
CHRNB4-204ENST00000559849 COG6Q9Y2V7 657 aa17■□□□□ 0.31
CHRNB4-204ENST00000559849 EAPPQ56P03 285 aaPredicted RBP17■□□□□ 0.31
CHRNB4-204ENST00000559849 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
CHRNB4-204ENST00000559849 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
CHRNB4-204ENST00000559849 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 STRIP1Q5VSL9 837 aa16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 ADARB2Q9NS39 739 aaKnown RBP16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 CEP126Q9P2H0 1117 aa16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 PSME4Q14997 1843 aa16.99■□□□□ 0.31
CHRNB4-204ENST00000559849 H7C1D1 291 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 TTLL5Q6EMB2 1281 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 RSBN1LQ6PCB5 846 aaPredicted RBP16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 USP50Q70EL3 339 aaPredicted RBP16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 LDHDQ86WU2 507 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 AGBL3Q8NEM8 1001 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 C1orf115Q9H7X2 142 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 IL1R1P14778 569 aa16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 FAM84BQ96KN1 310 aaPredicted RBP16.98■□□□□ 0.31
CHRNB4-204ENST00000559849 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 CLEC11AQ9Y240 323 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 FGFR2P21802 821 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 GYG1P46976 350 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 CAVIN4Q5BKX8 364 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 MICALL2Q8IY33 904 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 LPIN2Q92539 896 aa16.97■□□□□ 0.31
CHRNB4-204ENST00000559849 SASH1O94885 1247 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 GTF2IP78347 998 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 POLA2Q14181 598 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 DACT2Q5SW24 774 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 FBXW7Q969H0 707 aa16.96■□□□□ 0.31
CHRNB4-204ENST00000559849 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 ZNF609O15014 1411 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 SLC5A1P13866 664 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 FBXO33Q7Z6M2 555 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 GMLQ99445 158 aa16.95■□□□□ 0.3
CHRNB4-204ENST00000559849 USP17L8P0C7I0 530 aa16.94■□□□□ 0.3
CHRNB4-204ENST00000559849 CEP85Q6P2H3 762 aa16.94■□□□□ 0.3
CHRNB4-204ENST00000559849 SHTN1A0MZ66 631 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 ATP2B3Q16720 1220 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 HSPA6P17066 643 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 MMP14P50281 582 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 RPAP2Q8IXW5 612 aaPredicted RBP16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 OGFOD1Q8N543 542 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 AKAP2Q9Y2D5 859 aa16.93■□□□□ 0.3
CHRNB4-204ENST00000559849 BCAMP50895 628 aa16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 RRP1P56182 461 aaKnown RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 ZNF280AP59817 542 aaPredicted RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 TFCP2Q12800 502 aa16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 MXD3Q9BW11 206 aa16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 FRAT2O75474 233 aaPredicted RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 TBC1D10BQ4KMP7 808 aaPredicted RBP16.92■□□□□ 0.3
CHRNB4-204ENST00000559849 FAM205AQ6ZU69 1335 aa16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
CHRNB4-204ENST00000559849 RBM26Q5T8P6 1007 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms