RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
LRRC28-215ENST00000559774 COA1Q9GZY4 146 aa10.68□□□□□ -0.7
LRRC28-215ENST00000559774 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
LRRC28-215ENST00000559774 GOLGB1Q14789 3259 aaKnown RBP10.68□□□□□ -0.7
LRRC28-215ENST00000559774 LTBP1Q14766 1721 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 KDM2BQ8NHM5 1336 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 SEMA3EO15041 775 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 IGSF3O75054 1194 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 HIBADHP31937 336 aaKnown RBP10.67□□□□□ -0.7
LRRC28-215ENST00000559774 JDP2Q8WYK2 163 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 EAF2Q96CJ1 260 aaPredicted RBP10.67□□□□□ -0.7
LRRC28-215ENST00000559774 FAM84BQ96KN1 310 aaPredicted RBP10.67□□□□□ -0.7
LRRC28-215ENST00000559774 GNL3LQ9NVN8 582 aaKnown RBP10.67□□□□□ -0.7
LRRC28-215ENST00000559774 ZNF609O15014 1411 aa10.67□□□□□ -0.7
LRRC28-215ENST00000559774 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
LRRC28-215ENST00000559774 DUOX1Q9NRD9 1551 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 PPIP5K2O43314 1243 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
LRRC28-215ENST00000559774 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 IL1R1P14778 569 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 TIMM10P62072 90 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 CCDC158Q5M9N0 1113 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 VPS37DQ86XT2 251 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 LARGE2Q8N3Y3 721 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 XAGE2Q96GT9 111 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 ZNF277Q9NRM2 450 aaPredicted RBP10.66□□□□□ -0.7
LRRC28-215ENST00000559774 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
LRRC28-215ENST00000559774 G3V3G9 751 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 MMP14P50281 582 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 AOC3Q16853 763 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 AACSQ86V21 672 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 TDRD7Q8NHU6 1098 aaKnown RBP10.65□□□□□ -0.7
LRRC28-215ENST00000559774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.65□□□□□ -0.7
LRRC28-215ENST00000559774 GPATCH3Q96I76 525 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 CD209Q9NNX6 404 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 IL1RAPL2Q9NP60 686 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 ZNRF3Q9ULT6 936 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 TAF1P21675 1872 aa10.65□□□□□ -0.7
LRRC28-215ENST00000559774 TTC41PQ6P2S7 1318 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 FZD9O00144 591 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 SNAP23O00161 211 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 APBB1O00213 710 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 ARID4AP29374 1257 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-215ENST00000559774 CCDC102BQ68D86 513 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 SLC51AQ86UW1 340 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 TXNRD3Q86VQ6 643 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 DBNLQ9UJU6 430 aaKnown RBP10.64□□□□□ -0.71
LRRC28-215ENST00000559774 DENND2AQ9ULE3 1009 aa10.64□□□□□ -0.71
LRRC28-215ENST00000559774 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
LRRC28-215ENST00000559774 WTIPA6NIX2 430 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-215ENST00000559774 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 ECE2O60344 883 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 GYG1P46976 350 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 BCAMP50895 628 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
LRRC28-215ENST00000559774 RASSF7Q02833 373 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 TNIP1Q15025 636 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 STRIP1Q5VSL9 837 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 TMED8Q6PL24 325 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-215ENST00000559774 TICAM2Q86XR7 235 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 DBNDD2Q9BQY9 259 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 CCDC8Q9H0W5 538 aaPredicted RBP10.63□□□□□ -0.71
LRRC28-215ENST00000559774 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 STAP2Q9UGK3 403 aa10.63□□□□□ -0.71
LRRC28-215ENST00000559774 AOX1Q06278 1338 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 FAM205AQ6ZU69 1335 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 USP17L3A6NCW0 530 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 USP17L4A6NCW7 530 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 ERC2O15083 957 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 ATP5JP18859 108 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 MX1P20591 662 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 KLRK1P26718 216 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 ADORA1P30542 326 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 PRELPP51888 382 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 EIF6P56537 245 aaKnown RBP10.62□□□□□ -0.71
LRRC28-215ENST00000559774 C9orf131Q5VYM1 1079 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 USP17L1Q7RTZ2 530 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 WDR66Q8TBY9 1149 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 TBC1D22AQ8WUA7 517 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 ECHDC1Q9NTX5 307 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 RNF181Q9P0P0 153 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 SUGT1Q9Y2Z0 365 aa10.62□□□□□ -0.71
LRRC28-215ENST00000559774 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 SALL3Q9BXA9 1300 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 SALL1Q9NSC2 1324 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 SMARCA5O60264 1052 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 FRAT2O75474 233 aaPredicted RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 VIL1P09327 827 aaKnown RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 RPS12P25398 132 aaKnown RBP10.61□□□□□ -0.71
LRRC28-215ENST00000559774 PHKA1P46020 1223 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
LRRC28-215ENST00000559774 TTC39AQ5SRH9 613 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms