RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ANKIB1Q9P2G1 1089 aa18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 WWC3Q9ULE0 1092 aa18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 AKAP2Q9Y2D5 859 aa18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 PSME4Q14997 1843 aa18.28■□□□□ 0.52
SNRPA1-207ENST00000559309 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 A0A1B0GUL7 405 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 KLRK1P26718 216 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 ATP2B3Q16720 1220 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
SNRPA1-207ENST00000559309 UFL1O94874 794 aa18.26■□□□□ 0.51
SNRPA1-207ENST00000559309 FAM84BQ96KN1 310 aaPredicted RBP18.26■□□□□ 0.51
SNRPA1-207ENST00000559309 TAOK3Q9H2K8 898 aa18.26■□□□□ 0.51
SNRPA1-207ENST00000559309 DBNLQ9UJU6 430 aaKnown RBP18.26■□□□□ 0.51
SNRPA1-207ENST00000559309 TIMM10P62072 90 aa18.25■□□□□ 0.51
SNRPA1-207ENST00000559309 OS9Q13438 667 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-207ENST00000559309 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
SNRPA1-207ENST00000559309 IL1RAPL2Q9NP60 686 aa18.25■□□□□ 0.51
SNRPA1-207ENST00000559309 AKAP11Q9UKA4 1901 aa18.25■□□□□ 0.51
SNRPA1-207ENST00000559309 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 CLASRPQ8N2M8 674 aaKnown RBP18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 XAGE2Q96GT9 111 aa18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 CCDC136Q96JN2 1154 aa18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 GPBP1L1Q9HC44 474 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 SCN9AQ15858 1988 aa18.24■□□□□ 0.51
SNRPA1-207ENST00000559309 SLC5A1P13866 664 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 IL1R1P14778 569 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 ADORA1P30542 326 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 IARSP41252 1262 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 RASSF7Q02833 373 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 WASHC4Q2M389 1173 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 B4GALNT3Q6L9W6 998 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 GPR101Q96P66 508 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 EYA3Q99504 573 aa18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 TLR7Q9NYK1 1049 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-207ENST00000559309 C6orf229H3BNL8 230 aa18.22■□□□□ 0.51
SNRPA1-207ENST00000559309 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-207ENST00000559309 ANKRD45Q5TZF3 282 aa18.22■□□□□ 0.51
SNRPA1-207ENST00000559309 DBNDD2Q9BQY9 259 aa18.22■□□□□ 0.51
SNRPA1-207ENST00000559309 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-207ENST00000559309 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 ARID4AP29374 1257 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 TDRD7Q8NHU6 1098 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 COA1Q9GZY4 146 aa18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 PDS5AQ29RF7 1337 aaKnown RBP18.21■□□□□ 0.51
SNRPA1-207ENST00000559309 COL1A1P02452 1464 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 APBB1O00213 710 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 LMNB1P20700 586 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 PDE4AP27815 886 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 AOC3Q16853 763 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 ARHGAP27Q6ZUM4 889 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 AACSQ86V21 672 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 ZC3H12CQ9C0D7 883 aaKnown RBP18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 CCDC8Q9H0W5 538 aaPredicted RBP18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 CD209Q9NNX6 404 aa18.2■□□□□ 0.5
SNRPA1-207ENST00000559309 MYH13Q9UKX3 1938 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 PPIP5K2O43314 1243 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 PHKA1P46020 1223 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 GYG1P46976 350 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 KCNJ4P48050 445 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 BCAMP50895 628 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 PODNQ7Z5L7 613 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 OTUD7AQ8TE49 926 aaPredicted RBP18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 GTF3C3Q9Y5Q9 886 aa18.19■□□□□ 0.5
SNRPA1-207ENST00000559309 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 FZD9O00144 591 aa18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 HIBADHP31937 336 aaKnown RBP18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 LNPKQ9C0E8 428 aa18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 FAM205AQ6ZU69 1335 aa18.18■□□□□ 0.5
SNRPA1-207ENST00000559309 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 SEMA3EO15041 775 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 HSPA6P17066 643 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 ZNF804AQ7Z570 1209 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 PLEKHM2Q8IWE5 1019 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 NEUROD6Q96NK8 337 aa18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
SNRPA1-207ENST00000559309 ECE2O60344 883 aa18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 ATP5JP18859 108 aa18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 CAVIN4Q5BKX8 364 aa18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 AOX1Q06278 1338 aa18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 DOCK2Q92608 1830 aa18.16■□□□□ 0.5
SNRPA1-207ENST00000559309 MCAMP43121 646 aa18.15■□□□□ 0.5
SNRPA1-207ENST00000559309 PDE1AP54750 535 aa18.15■□□□□ 0.5
SNRPA1-207ENST00000559309 SCARF1Q14162 830 aa18.15■□□□□ 0.5
SNRPA1-207ENST00000559309 LARGE2Q8N3Y3 721 aa18.15■□□□□ 0.5
SNRPA1-207ENST00000559309 ZNRF3Q9ULT6 936 aa18.15■□□□□ 0.5
SNRPA1-207ENST00000559309 KIF3CO14782 793 aa18.14■□□□□ 0.49
SNRPA1-207ENST00000559309 UQCRFS1P1P0C7P4 283 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms