RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 WBP1LQ9NX94 342 aa22.46■■□□□ 1.19
TPM1-218ENST00000559281 EGFRP00533 1210 aa22.45■■□□□ 1.18
TPM1-218ENST00000559281 SULF1Q8IWU6 871 aa22.45■■□□□ 1.18
TPM1-218ENST00000559281 HHIPL1Q96JK4 782 aa22.45■■□□□ 1.18
TPM1-218ENST00000559281 PTPRCP08575 1304 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 CTCFP49711 727 aaPredicted RBP22.44■■□□□ 1.18
TPM1-218ENST00000559281 MMP14P50281 582 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 GRM1Q13255 1194 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 STRIP1Q5VSL9 837 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 CYP4F22Q6NT55 531 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 OGFOD1Q8N543 542 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 MRPL50Q8N5N7 158 aaKnown RBP22.44■■□□□ 1.18
TPM1-218ENST00000559281 GMLQ99445 158 aa22.44■■□□□ 1.18
TPM1-218ENST00000559281 ZNF609O15014 1411 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 MYO3BQ8WXR4 1341 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 FOXN1O15353 648 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 TNS4Q8IZW8 715 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 FBXW7Q969H0 707 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 BEGAINQ9BUH8 593 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 PCNTO95613 3336 aa22.43■■□□□ 1.18
TPM1-218ENST00000559281 MAP2K2P36507 400 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 SCARF1Q14162 830 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 TTLL5Q6EMB2 1281 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 LDHAL6AQ6ZMR3 332 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 TXNRD3Q86VQ6 643 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 MYOZ2Q9NPC6 264 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
TPM1-218ENST00000559281 EPHA10Q5JZY3 1008 aa22.41■■□□□ 1.18
TPM1-218ENST00000559281 DACT2Q5SW24 774 aa22.41■■□□□ 1.18
TPM1-218ENST00000559281 C2orf69Q8N8R5 385 aa22.41■■□□□ 1.18
TPM1-218ENST00000559281 CNNM1Q9NRU3 951 aa22.41■■□□□ 1.18
TPM1-218ENST00000559281 ALDH1L2Q3SY69 923 aa22.4■■□□□ 1.18
TPM1-218ENST00000559281 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
TPM1-218ENST00000559281 PRDM10Q9NQV6 1147 aa22.4■■□□□ 1.18
TPM1-218ENST00000559281 MYH3P11055 1940 aa22.39■■□□□ 1.18
TPM1-218ENST00000559281 TAF5LO75529 589 aa22.39■■□□□ 1.17
TPM1-218ENST00000559281 C15orf52Q6ZUT6 534 aaKnown RBP22.39■■□□□ 1.17
TPM1-218ENST00000559281 HELBQ8NG08 1087 aaPredicted RBP22.39■■□□□ 1.17
TPM1-218ENST00000559281 UTYO14607 1347 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 ADM5C9JUS6 153 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
TPM1-218ENST00000559281 HUNKP57058 714 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 ANGEL2Q5VTE6 544 aaKnown RBP22.38■■□□□ 1.17
TPM1-218ENST00000559281 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 SUCLG2Q96I99 432 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 GBA2Q9HCG7 927 aaPredicted RBP22.38■■□□□ 1.17
TPM1-218ENST00000559281 CD209Q9NNX6 404 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 HDAC9Q9UKV0 1011 aa22.38■■□□□ 1.17
TPM1-218ENST00000559281 NBPF7P0C2Y1 421 aaPredicted RBP22.37■■□□□ 1.17
TPM1-218ENST00000559281 KLRK1P26718 216 aa22.37■■□□□ 1.17
TPM1-218ENST00000559281 GTF2IP78347 998 aa22.37■■□□□ 1.17
TPM1-218ENST00000559281 ZNF804AQ7Z570 1209 aa22.37■■□□□ 1.17
TPM1-218ENST00000559281 ZNF594Q96JF6 807 aaPredicted RBP22.37■■□□□ 1.17
TPM1-218ENST00000559281 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
TPM1-218ENST00000559281 PLIN1O60240 522 aa22.36■■□□□ 1.17
TPM1-218ENST00000559281 DLK2Q6UY11 383 aa22.36■■□□□ 1.17
TPM1-218ENST00000559281 TRMT2AQ8IZ69 625 aaKnown RBP22.36■■□□□ 1.17
TPM1-218ENST00000559281 MXD3Q9BW11 206 aa22.36■■□□□ 1.17
TPM1-218ENST00000559281 SCN9AQ15858 1988 aa22.36■■□□□ 1.17
TPM1-218ENST00000559281 ASTN2O75129 1339 aaPredicted RBP22.35■■□□□ 1.17
TPM1-218ENST00000559281 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
TPM1-218ENST00000559281 SNAP23O00161 211 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 AOC2O75106 756 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 LBX1P52954 281 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 NOGQ13253 232 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 CDCA5Q96FF9 252 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 KAZALD1Q96I82 304 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
TPM1-218ENST00000559281 IL1R1P14778 569 aa22.33■■□□□ 1.17
TPM1-218ENST00000559281 UBE4AQ14139 1066 aa22.33■■□□□ 1.17
TPM1-218ENST00000559281 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
TPM1-218ENST00000559281 RGMBQ6NW40 437 aa22.33■■□□□ 1.17
TPM1-218ENST00000559281 KIAA0825Q8IV33 1275 aa22.33■■□□□ 1.17
TPM1-218ENST00000559281 CCDC102AQ96A19 550 aa22.33■■□□□ 1.17
TPM1-218ENST00000559281 BICC1Q9H694 974 aaKnown RBP22.33■■□□□ 1.17
TPM1-218ENST00000559281 WNT10BO00744 389 aa22.32■■□□□ 1.16
TPM1-218ENST00000559281 CA12O43570 354 aa22.32■■□□□ 1.16
TPM1-218ENST00000559281 NBPF9Q3BBW0 867 aa22.32■■□□□ 1.16
TPM1-218ENST00000559281 MROH5Q6ZUA9 1318 aa22.31■■□□□ 1.16
TPM1-218ENST00000559281 IRS2Q9Y4H2 1338 aa22.31■■□□□ 1.16
TPM1-218ENST00000559281 HSPA8P11142 646 aaKnown RBP22.31■■□□□ 1.16
TPM1-218ENST00000559281 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
TPM1-218ENST00000559281 FKBP1BP68106 108 aa22.31■■□□□ 1.16
TPM1-218ENST00000559281 USP44Q9H0E7 712 aa22.31■■□□□ 1.16
TPM1-218ENST00000559281 ZNF157P51786 506 aaPredicted RBP22.3■■□□□ 1.16
TPM1-218ENST00000559281 FKBP1AP62942 108 aaKnown RBP22.3■■□□□ 1.16
TPM1-218ENST00000559281 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
TPM1-218ENST00000559281 SASH1O94885 1247 aa22.29■■□□□ 1.16
TPM1-218ENST00000559281 PUS3Q9BZE2 481 aaKnown RBP22.29■■□□□ 1.16
TPM1-218ENST00000559281 HIBADHP31937 336 aaKnown RBP22.28■■□□□ 1.16
TPM1-218ENST00000559281 NF2P35240 595 aa22.28■■□□□ 1.16
TPM1-218ENST00000559281 DLGAP5Q15398 846 aa22.28■■□□□ 1.16
TPM1-218ENST00000559281 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
TPM1-218ENST00000559281 API5Q9BZZ5 524 aaKnown RBP22.28■■□□□ 1.16
TPM1-218ENST00000559281 HDAC5Q9UQL6 1122 aa22.28■■□□□ 1.16
TPM1-218ENST00000559281 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
TPM1-218ENST00000559281 APOBEC3FQ8IUX4 373 aaKnown RBP22.27■■□□□ 1.16
TPM1-218ENST00000559281 NOB1Q9ULX3 412 aaKnown RBP22.27■■□□□ 1.16
TPM1-218ENST00000559281 METTL24Q5JXM2 366 aa22.26■■□□□ 1.15
TPM1-218ENST00000559281 VPS37DQ86XT2 251 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms