RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 SRA1Q9HD15 236 aaKnown RBP17.44■□□□□ 0.38
CASC4-208ENST00000559151 PCBP4P57723 403 aaKnown RBP17.43■□□□□ 0.38
CASC4-208ENST00000559151 ERMP1Q7Z2K6 904 aa17.43■□□□□ 0.38
CASC4-208ENST00000559151 ZNF654Q8IZM8 581 aa17.43■□□□□ 0.38
CASC4-208ENST00000559151 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
CASC4-208ENST00000559151 COPRSQ9NQ92 184 aa17.43■□□□□ 0.38
CASC4-208ENST00000559151 FBXO24O75426 580 aa17.42■□□□□ 0.38
CASC4-208ENST00000559151 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
CASC4-208ENST00000559151 SPRED3Q2MJR0 410 aa17.42■□□□□ 0.38
CASC4-208ENST00000559151 TMEM102Q8N9M5 508 aaPredicted RBP17.42■□□□□ 0.38
CASC4-208ENST00000559151 BHLHE41Q9C0J9 482 aaPredicted RBP17.42■□□□□ 0.38
CASC4-208ENST00000559151 DRC1Q96MC2 740 aa17.41■□□□□ 0.38
CASC4-208ENST00000559151 PPM1HQ9ULR3 514 aa17.41■□□□□ 0.38
CASC4-208ENST00000559151 SIN3BO75182 1162 aa17.4■□□□□ 0.38
CASC4-208ENST00000559151 CCDC85BQ15834 202 aaPredicted RBP17.4■□□□□ 0.38
CASC4-208ENST00000559151 NXPE3Q969Y0 559 aa17.4■□□□□ 0.38
CASC4-208ENST00000559151 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
CASC4-208ENST00000559151 PBX4Q9BYU1 374 aa17.4■□□□□ 0.38
CASC4-208ENST00000559151 GHRHP01286 108 aa17.39■□□□□ 0.37
CASC4-208ENST00000559151 EIF2AK2P19525 551 aaKnown RBP17.39■□□□□ 0.37
CASC4-208ENST00000559151 MX2P20592 715 aa17.39■□□□□ 0.37
CASC4-208ENST00000559151 MAP3K10Q02779 954 aa17.39■□□□□ 0.37
CASC4-208ENST00000559151 GAS6Q14393 721 aa17.39■□□□□ 0.37
CASC4-208ENST00000559151 TRIM56Q9BRZ2 755 aaKnown RBP17.39■□□□□ 0.37
CASC4-208ENST00000559151 PDE2AO00408 941 aaPredicted RBP17.38■□□□□ 0.37
CASC4-208ENST00000559151 ASAP3Q8TDY4 903 aa17.38■□□□□ 0.37
CASC4-208ENST00000559151 ITPKAP23677 461 aa17.37■□□□□ 0.37
CASC4-208ENST00000559151 PCSK7Q16549 785 aa17.37■□□□□ 0.37
CASC4-208ENST00000559151 TPTE2Q6XPS3 522 aa17.37■□□□□ 0.37
CASC4-208ENST00000559151 KBTBD4Q9NVX7 518 aa17.37■□□□□ 0.37
CASC4-208ENST00000559151 KLF15Q9UIH9 416 aa17.37■□□□□ 0.37
CASC4-208ENST00000559151 A0A096LPE4 126 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 A0A1W2PPZ6 126 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 LOC105371045A0A1W2PR82 267 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 F6X3S4 739 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 CPB1P15086 417 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 SF3A1Q15459 793 aaKnown RBP17.36■□□□□ 0.37
CASC4-208ENST00000559151 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CASC4-208ENST00000559151 TNFRSF25Q93038 417 aa17.35■□□□□ 0.37
CASC4-208ENST00000559151 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
CASC4-208ENST00000559151 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
CASC4-208ENST00000559151 SLC6A14Q9UN76 642 aa17.35■□□□□ 0.37
CASC4-208ENST00000559151 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
CASC4-208ENST00000559151 FAM35AQ86V20 835 aa17.34■□□□□ 0.37
CASC4-208ENST00000559151 SLC43A3Q8NBI5 491 aa17.34■□□□□ 0.37
CASC4-208ENST00000559151 PPP1R1BQ9UD71 204 aaPredicted RBP17.34■□□□□ 0.37
CASC4-208ENST00000559151 CEP135Q66GS9 1140 aa17.33■□□□□ 0.36
CASC4-208ENST00000559151 GPR161Q8N6U8 529 aaKnown RBP17.33■□□□□ 0.36
CASC4-208ENST00000559151 POP1Q99575 1024 aaKnown RBP17.33■□□□□ 0.36
CASC4-208ENST00000559151 NAGPAQ9UK23 515 aa17.33■□□□□ 0.36
CASC4-208ENST00000559151 MAP3K11Q16584 847 aa17.32■□□□□ 0.36
CASC4-208ENST00000559151 RSRP1Q9BUV0 290 aa17.32■□□□□ 0.36
CASC4-208ENST00000559151 ZNF576Q9H609 170 aa17.32■□□□□ 0.36
CASC4-208ENST00000559151 NXF1Q9UBU9 619 aaKnown RBP17.32■□□□□ 0.36
CASC4-208ENST00000559151 CELA3AP09093 270 aa17.31■□□□□ 0.36
CASC4-208ENST00000559151 ARAFP10398 606 aa17.31■□□□□ 0.36
CASC4-208ENST00000559151 GNL2Q13823 731 aaKnown RBP17.31■□□□□ 0.36
CASC4-208ENST00000559151 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
CASC4-208ENST00000559151 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
CASC4-208ENST00000559151 ZFYVE1Q9HBF4 777 aa17.31■□□□□ 0.36
CASC4-208ENST00000559151 SMNDC1O75940 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
CASC4-208ENST00000559151 ADH6P28332 368 aa17.3■□□□□ 0.36
CASC4-208ENST00000559151 ADH7P40394 386 aa17.3■□□□□ 0.36
CASC4-208ENST00000559151 PERM1Q5SV97 790 aa17.3■□□□□ 0.36
CASC4-208ENST00000559151 PLD4Q96BZ4 506 aa17.3■□□□□ 0.36
CASC4-208ENST00000559151 FAAP100Q0VG06 881 aa17.29■□□□□ 0.36
CASC4-208ENST00000559151 ADAMTSL4Q6UY14 1074 aa17.29■□□□□ 0.36
CASC4-208ENST00000559151 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
CASC4-208ENST00000559151 FCHSD1Q86WN1 690 aa17.28■□□□□ 0.36
CASC4-208ENST00000559151 RELL1Q8IUW5 271 aa17.28■□□□□ 0.36
CASC4-208ENST00000559151 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
CASC4-208ENST00000559151 MBIPQ9NS73 344 aa17.28■□□□□ 0.36
CASC4-208ENST00000559151 PAK2Q13177 524 aa17.27■□□□□ 0.36
CASC4-208ENST00000559151 MICALL1Q8N3F8 863 aa17.27■□□□□ 0.36
CASC4-208ENST00000559151 MDFIQ99750 246 aa17.27■□□□□ 0.36
CASC4-208ENST00000559151 CEP44Q9C0F1 390 aa17.27■□□□□ 0.36
CASC4-208ENST00000559151 SMG9Q9H0W8 520 aaKnown RBP17.27■□□□□ 0.36
CASC4-208ENST00000559151 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 ADARB2-AS1A8MUL3 147 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 MINDY4BA8MYZ0 360 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 DNAJA1P31689 397 aaKnown RBP17.26■□□□□ 0.35
CASC4-208ENST00000559151 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
CASC4-208ENST00000559151 PWP1Q13610 501 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 ELMSAN1Q6PJG2 1045 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 NECAB3Q96P71 396 aaPredicted RBP17.26■□□□□ 0.35
CASC4-208ENST00000559151 PRKAG2Q9UGJ0 569 aa17.26■□□□□ 0.35
CASC4-208ENST00000559151 GPN3Q9UHW5 284 aaPredicted RBP17.26■□□□□ 0.35
CASC4-208ENST00000559151 ENC1O14682 589 aa17.25■□□□□ 0.35
CASC4-208ENST00000559151 MAP2K3P46734 347 aa17.25■□□□□ 0.35
CASC4-208ENST00000559151 BSNDQ8WZ55 320 aa17.25■□□□□ 0.35
CASC4-208ENST00000559151 TMEM74Q96NL1 305 aa17.25■□□□□ 0.35
CASC4-208ENST00000559151 LPIN3Q9BQK8 851 aa17.25■□□□□ 0.35
CASC4-208ENST00000559151 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
CASC4-208ENST00000559151 H3BM21 787 aa17.24■□□□□ 0.35
CASC4-208ENST00000559151 RPS26P11Q5JNZ5 115 aaPredicted RBP17.24■□□□□ 0.35
CASC4-208ENST00000559151 UBXN4Q92575 508 aa17.24■□□□□ 0.35
CASC4-208ENST00000559151 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
CASC4-208ENST00000559151 TRIM33Q9UPN9 1127 aa17.24■□□□□ 0.35
CASC4-208ENST00000559151 LIG3P49916 1009 aa17.23■□□□□ 0.35
CASC4-208ENST00000559151 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms