RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 IARSP41252 1262 aaKnown RBP9.38□□□□□ -0.91
LRRC28-211ENST00000558890 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
LRRC28-211ENST00000558890 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 HSCBQ8IWL3 235 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 MPNDQ8N594 471 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 GPR108Q9NPR9 543 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 RIPOR2Q9Y4F9 1068 aa9.38□□□□□ -0.91
LRRC28-211ENST00000558890 ZC3H4Q9UPT8 1303 aaKnown RBP9.37□□□□□ -0.91
LRRC28-211ENST00000558890 PNMA6EA0A0J9YXQ4 647 aa9.37□□□□□ -0.91
LRRC28-211ENST00000558890 EYA2O00167 538 aa9.37□□□□□ -0.91
LRRC28-211ENST00000558890 CDC45O75419 566 aa9.37□□□□□ -0.91
LRRC28-211ENST00000558890 KIAA2012Q0VF49 1180 aa9.37□□□□□ -0.91
LRRC28-211ENST00000558890 ZNF594Q96JF6 807 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-211ENST00000558890 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
LRRC28-211ENST00000558890 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 YDJCA8MPS7 323 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 SNAP23O00161 211 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 KIF3CO14782 793 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 DPP8Q6V1X1 898 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-211ENST00000558890 TXNRD3Q86VQ6 643 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 ANKRD2Q9GZV1 360 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 NSFL1CQ9UNZ2 370 aaKnown RBP9.36□□□□□ -0.91
LRRC28-211ENST00000558890 DICER1Q9UPY3 1922 aaKnown RBP9.36□□□□□ -0.91
LRRC28-211ENST00000558890 CCDC88AQ3V6T2 1871 aa9.36□□□□□ -0.91
LRRC28-211ENST00000558890 IGSF3O75054 1194 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
LRRC28-211ENST00000558890 CHRNDQ07001 517 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 AOC3Q16853 763 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 LRRC24Q50LG9 513 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 TAF7LQ5H9L4 462 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 CASC1Q6TDU7 716 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 LDHAL6AQ6ZMR3 332 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 C15orf52Q6ZUT6 534 aaKnown RBP9.35□□□□□ -0.91
LRRC28-211ENST00000558890 ATG9AQ7Z3C6 839 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 VGLL2Q8N8G2 317 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 KLHDC4Q8TBB5 520 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 L3MBTL3Q96JM7 780 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-211ENST00000558890 GPR101Q96P66 508 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-211ENST00000558890 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 TMX4Q9H1E5 349 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-211ENST00000558890 KCNQ5Q9NR82 932 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 AKAP2Q9Y2D5 859 aa9.35□□□□□ -0.91
LRRC28-211ENST00000558890 XDHP47989 1333 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 ZNF541Q9H0D2 1346 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 ZNF609O15014 1411 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-211ENST00000558890 ATP2B4P23634 1241 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 G3BP1Q13283 466 aaKnown RBP eCLIP9.34□□□□□ -0.91
LRRC28-211ENST00000558890 NMRK2Q9NPI5 230 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 LEMD3Q9Y2U8 911 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 CHMP3Q9Y3E7 222 aa9.34□□□□□ -0.91
LRRC28-211ENST00000558890 PSME4Q14997 1843 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 TAF5LO75529 589 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 SURF6O75683 361 aaKnown RBP9.33□□□□□ -0.92
LRRC28-211ENST00000558890 PDE8BO95263 885 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 FGFR2P21802 821 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 KLRK1P26718 216 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 CXCL9Q07325 125 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 UBE4AQ14139 1066 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 WASHC4Q2M389 1173 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 SUPT20HQ8NEM7 779 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-211ENST00000558890 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 SLKQ9H2G2 1235 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-211ENST00000558890 CNNM1Q9NRU3 951 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 CEP126Q9P2H0 1117 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 GGA1Q9UJY5 639 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 ZNRF3Q9ULT6 936 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-211ENST00000558890 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
LRRC28-211ENST00000558890 PDS5AQ29RF7 1337 aaKnown RBP9.32□□□□□ -0.92
LRRC28-211ENST00000558890 UFL1O94874 794 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 PUM3Q15397 648 aaKnown RBP9.32□□□□□ -0.92
LRRC28-211ENST00000558890 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
LRRC28-211ENST00000558890 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 SNX21Q969T3 373 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 ZNF512BQ96KM6 892 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-211ENST00000558890 GMLQ99445 158 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 ANKIB1Q9P2G1 1089 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 PA2G4Q9UQ80 394 aaKnown RBP9.32□□□□□ -0.92
LRRC28-211ENST00000558890 MYH13Q9UKX3 1938 aa9.32□□□□□ -0.92
LRRC28-211ENST00000558890 ZNF804BA4D1E1 1349 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 AOX1Q06278 1338 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 RIMBP2O15034 1052 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 SASH1O94885 1247 aa9.31□□□□□ -0.92
LRRC28-211ENST00000558890 VIL1P09327 827 aaKnown RBP9.31□□□□□ -0.92
LRRC28-211ENST00000558890 DOK7Q18PE1 504 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms