RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SERPINB2P05120 415 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 CTDSPL2Q05D32 466 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 C1orf141Q5JVX7 400 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 C2CD5Q86YS7 1000 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 AEBP1Q8IUX7 1158 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 BAP1Q92560 729 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 PRDM10Q9NQV6 1147 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 TOR4AQ9NXH8 423 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 NARFQ9UHQ1 456 aa7.48□□□□□ -1.21
LRRC28-208ENST00000558771 DICER1Q9UPY3 1922 aaKnown RBP7.48□□□□□ -1.21
LRRC28-208ENST00000558771 COL15A1P39059 1388 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 CNTNAP1P78357 1384 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 SCN11AQ9UI33 1791 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 H0YIN7 160 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 CYP19A1P11511 503 aaPredicted RBP7.47□□□□□ -1.21
LRRC28-208ENST00000558771 SH3BP2P78314 561 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 ERFEQ4G0M1 354 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 CYP4X1Q8N118 509 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 MRGPRX2Q96LB1 330 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 MAP10Q9P2G4 905 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 FER1L6Q2WGJ9 1857 aa7.47□□□□□ -1.21
LRRC28-208ENST00000558771 C21orf2O43822 256 aa7.46□□□□□ -1.22
LRRC28-208ENST00000558771 DGAT1O75907 488 aa7.46□□□□□ -1.22
LRRC28-208ENST00000558771 DDNO94850 711 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-208ENST00000558771 CTCFP49711 727 aaPredicted RBP7.46□□□□□ -1.22
LRRC28-208ENST00000558771 SLC39A6Q13433 755 aa7.46□□□□□ -1.22
LRRC28-208ENST00000558771 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.22
LRRC28-208ENST00000558771 ZNF622Q969S3 477 aaKnown RBP eCLIP7.46□□□□□ -1.22
LRRC28-208ENST00000558771 PASKQ96RG2 1323 aa7.46□□□□□ -1.22
LRRC28-208ENST00000558771 ANKRD31Q8N7Z5 1873 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 FAM187AA6NFU0 413 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 VEGFBP49765 207 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 PKDCCQ504Y2 493 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 SULT6B1Q6IMI4 303 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 BICDL1Q6ZP65 573 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 SNIP1Q8TAD8 396 aaKnown RBP7.45□□□□□ -1.22
LRRC28-208ENST00000558771 AIDAQ96BJ3 306 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 SLC52A2Q9HAB3 445 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 LGR6Q9HBX8 967 aa7.45□□□□□ -1.22
LRRC28-208ENST00000558771 COL11A2P13942 1736 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-208ENST00000558771 VIRMAQ69YN4 1812 aaKnown RBP7.44□□□□□ -1.22
LRRC28-208ENST00000558771 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-208ENST00000558771 LCE2BO14633 110 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 AP1G2O75843 785 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 RFC5P40937 340 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 LBX1P52954 281 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 AKAP4Q5JQC9 854 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 TAOK3Q9H2K8 898 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 LTBP3Q9NS15 1303 aa7.44□□□□□ -1.22
LRRC28-208ENST00000558771 MRC1P22897 1456 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 TMEM88BA6NKF7 163 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 RNMTO43148 476 aaKnown RBP7.43□□□□□ -1.22
LRRC28-208ENST00000558771 CANXP27824 592 aaKnown RBP7.43□□□□□ -1.22
LRRC28-208ENST00000558771 PDE6BP35913 854 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 PRR5LQ6MZQ0 368 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 EHBP1Q8NDI1 1231 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 LRRN4Q8WUT4 740 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 ABHD8Q96I13 439 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 POLR3GLQ9BT43 218 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 BRIP1Q9BX63 1249 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 TAF1DQ9H5J8 278 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-208ENST00000558771 SCN4AP35499 1836 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 SLX4Q8IY92 1834 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 CACNA1SQ13698 1873 aa7.43□□□□□ -1.22
LRRC28-208ENST00000558771 IQCA1LA6NCM1 817 aa7.42□□□□□ -1.22
LRRC28-208ENST00000558771 SIAH2O43255 324 aa7.42□□□□□ -1.22
LRRC28-208ENST00000558771 HSPA8P11142 646 aaKnown RBP7.42□□□□□ -1.22
LRRC28-208ENST00000558771 IL13P35225 146 aa7.42□□□□□ -1.22
LRRC28-208ENST00000558771 EIF5P55010 431 aaKnown RBP7.42□□□□□ -1.22
LRRC28-208ENST00000558771 SCN7AQ01118 1682 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 UBR2Q8IWV8 1755 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 A0A087WZG4 1122 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 DEFB115Q30KQ5 88 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 EAPPQ56P03 285 aaPredicted RBP7.41□□□□□ -1.22
LRRC28-208ENST00000558771 PRPF40BQ6NWY9 871 aaKnown RBP7.41□□□□□ -1.22
LRRC28-208ENST00000558771 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 CNKSR1Q969H4 720 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 ADAMTSL1Q8N6G6 1762 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 ARFGEF2Q9Y6D5 1785 aa7.41□□□□□ -1.22
LRRC28-208ENST00000558771 RASSF10A6NK89 507 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 J3QL48 77 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 STARD3NLO95772 234 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 SRGNP10124 158 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 SMPD1P17405 629 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 VARSP26640 1264 aaKnown RBP7.4□□□□□ -1.22
LRRC28-208ENST00000558771 TMEM259Q4ZIN3 620 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 STYK1Q6J9G0 422 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 MORC1Q86VD1 984 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 FOXJ1Q92949 421 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 MASTLQ96GX5 879 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 PANK3Q9H999 370 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 TBC1D2BQ9UPU7 963 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 WDR33Q9C0J8 1336 aaKnown RBP7.4□□□□□ -1.22
LRRC28-208ENST00000558771 ZNF541Q9H0D2 1346 aa7.4□□□□□ -1.22
LRRC28-208ENST00000558771 NPHP1O15259 732 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms