RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CIAO1O76071 339 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 PDE8BO95263 885 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
SMAD3-205ENST00000558428 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 PODNQ7Z5L7 613 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 COPRSQ9NQ92 184 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 HACL1Q9UJ83 578 aa15.37■□□□□ 0.05
SMAD3-205ENST00000558428 GMPSP49915 693 aaPredicted RBP15.36■□□□□ 0.05
SMAD3-205ENST00000558428 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
SMAD3-205ENST00000558428 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
SMAD3-205ENST00000558428 C15orf52Q6ZUT6 534 aaKnown RBP15.36■□□□□ 0.05
SMAD3-205ENST00000558428 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
SMAD3-205ENST00000558428 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
SMAD3-205ENST00000558428 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
SMAD3-205ENST00000558428 IL15P40933 162 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-205ENST00000558428 SCNN1DP51172 638 aa15.35■□□□□ 0.05
SMAD3-205ENST00000558428 ZNF804AQ7Z570 1209 aa15.35■□□□□ 0.05
SMAD3-205ENST00000558428 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
SMAD3-205ENST00000558428 CD209Q9NNX6 404 aa15.35■□□□□ 0.05
SMAD3-205ENST00000558428 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
SMAD3-205ENST00000558428 USP17L3A6NCW0 530 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 USP17L4A6NCW7 530 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 TOMM70O94826 608 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 EPHX2P34913 555 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 POLA2Q14181 598 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
SMAD3-205ENST00000558428 CEP85Q6P2H3 762 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 USP17L1Q7RTZ2 530 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 FBXW7Q969H0 707 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
SMAD3-205ENST00000558428 ZBTB12Q9Y330 459 aaPredicted RBP15.34■□□□□ 0.05
SMAD3-205ENST00000558428 VIL1P09327 827 aaKnown RBP15.33■□□□□ 0.04
SMAD3-205ENST00000558428 IFIT1P09914 478 aaKnown RBP15.33■□□□□ 0.04
SMAD3-205ENST00000558428 EPS15P42566 896 aa15.33■□□□□ 0.04
SMAD3-205ENST00000558428 GYG1P46976 350 aa15.33■□□□□ 0.04
SMAD3-205ENST00000558428 SSH3Q8TE77 659 aa15.33■□□□□ 0.04
SMAD3-205ENST00000558428 GPRC5DQ9NZD1 345 aa15.33■□□□□ 0.04
SMAD3-205ENST00000558428 SLC5A1P13866 664 aa15.32■□□□□ 0.04
SMAD3-205ENST00000558428 FGFR2P21802 821 aa15.32■□□□□ 0.04
SMAD3-205ENST00000558428 RPS12P25398 132 aaKnown RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 C1QTNF8P60827 252 aa15.32■□□□□ 0.04
SMAD3-205ENST00000558428 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 EAPPQ56P03 285 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 RSBN1LQ6PCB5 846 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 DPF2Q92785 391 aa15.32■□□□□ 0.04
SMAD3-205ENST00000558428 FAM84BQ96KN1 310 aaPredicted RBP15.32■□□□□ 0.04
SMAD3-205ENST00000558428 ZNF646O15015 1829 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-205ENST00000558428 IL1R1P14778 569 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 GTF2IP78347 998 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-205ENST00000558428 ATP2B3Q16720 1220 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 CAVIN4Q5BKX8 364 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 TTLL5Q6EMB2 1281 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
SMAD3-205ENST00000558428 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 LPIN2Q92539 896 aa15.31■□□□□ 0.04
SMAD3-205ENST00000558428 CNOT7Q9UIV1 285 aaKnown RBP15.31■□□□□ 0.04
SMAD3-205ENST00000558428 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 H7C1D1 291 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
SMAD3-205ENST00000558428 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 TFCP2Q12800 502 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 DACT2Q5SW24 774 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 SMC1BQ8NDV3 1235 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 AGBL3Q8NEM8 1001 aa15.3■□□□□ 0.04
SMAD3-205ENST00000558428 ADARB2Q9NS39 739 aaKnown RBP15.3■□□□□ 0.04
SMAD3-205ENST00000558428 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 ZNF609O15014 1411 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 BCAMP50895 628 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-205ENST00000558428 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 LDHDQ86WU2 507 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 RPAP2Q8IXW5 612 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-205ENST00000558428 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
SMAD3-205ENST00000558428 MXD3Q9BW11 206 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 AKAP2Q9Y2D5 859 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 ARAP2Q8WZ64 1704 aa15.29■□□□□ 0.04
SMAD3-205ENST00000558428 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 HMMRO75330 724 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 FRAT2O75474 233 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-205ENST00000558428 FSTL1Q12841 308 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 GMLQ99445 158 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 IQSEC3Q9UPP2 1182 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-205ENST00000558428 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 NOP58Q9Y2X3 529 aaKnown RBP15.28■□□□□ 0.04
SMAD3-205ENST00000558428 ADAMTSL1Q8N6G6 1762 aa15.28■□□□□ 0.04
SMAD3-205ENST00000558428 SASH1O94885 1247 aa15.27■□□□□ 0.04
SMAD3-205ENST00000558428 TIMM10P62072 90 aa15.27■□□□□ 0.04
SMAD3-205ENST00000558428 CHADLQ6NUI6 762 aa15.27■□□□□ 0.04
SMAD3-205ENST00000558428 SAMD7Q7Z3H4 446 aa15.27■□□□□ 0.04
SMAD3-205ENST00000558428 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
SMAD3-205ENST00000558428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
SMAD3-205ENST00000558428 A0A1B0GUL7 405 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms