RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 WWC3Q9ULE0 1092 aa11.38□□□□□ -0.59
CHD8-214ENST00000557727 TK2O00142 265 aa11.37□□□□□ -0.59
CHD8-214ENST00000557727 RRP1P56182 461 aaKnown RBP11.37□□□□□ -0.59
CHD8-214ENST00000557727 PRPF40BQ6NWY9 871 aaKnown RBP11.37□□□□□ -0.59
CHD8-214ENST00000557727 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
CHD8-214ENST00000557727 GREM2Q9H772 168 aa11.37□□□□□ -0.59
CHD8-214ENST00000557727 SEC31BQ9NQW1 1179 aa11.37□□□□□ -0.59
CHD8-214ENST00000557727 C9orf78Q9NZ63 289 aaPredicted RBP11.37□□□□□ -0.59
CHD8-214ENST00000557727 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
CHD8-214ENST00000557727 PDE3AQ14432 1141 aa11.36□□□□□ -0.59
CHD8-214ENST00000557727 FAM161AQ3B820 660 aa11.36□□□□□ -0.59
CHD8-214ENST00000557727 OLFM4Q6UX06 510 aa11.36□□□□□ -0.59
CHD8-214ENST00000557727 CELF1Q92879 486 aaKnown RBP11.36□□□□□ -0.59
CHD8-214ENST00000557727 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
CHD8-214ENST00000557727 ZNF622Q969S3 477 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD8-214ENST00000557727 BICC1Q9H694 974 aaKnown RBP11.36□□□□□ -0.59
CHD8-214ENST00000557727 PRELPP51888 382 aa11.35□□□□□ -0.59
CHD8-214ENST00000557727 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 DALRD3Q5D0E6 543 aaKnown RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 PPP4R3BQ5MIZ7 849 aa11.35□□□□□ -0.59
CHD8-214ENST00000557727 RPGRQ92834 1020 aaKnown RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 ZNF646O15015 1829 aaPredicted RBP11.35□□□□□ -0.59
CHD8-214ENST00000557727 COL4A5P29400 1685 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
CHD8-214ENST00000557727 GRAPQ13588 217 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 ITPRIPQ8IWB1 547 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
CHD8-214ENST00000557727 GRAPLQ8TC17 118 aaPredicted RBP11.34□□□□□ -0.59
CHD8-214ENST00000557727 BCS1LQ9Y276 419 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
CHD8-214ENST00000557727 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
CHD8-214ENST00000557727 NFKBIEO00221 500 aa11.33□□□□□ -0.6
CHD8-214ENST00000557727 C21orf2O43822 256 aa11.33□□□□□ -0.6
CHD8-214ENST00000557727 UBTFL1P0CB47 393 aaPredicted RBP11.33□□□□□ -0.6
CHD8-214ENST00000557727 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
CHD8-214ENST00000557727 ITGA6P23229 1130 aa11.33□□□□□ -0.6
CHD8-214ENST00000557727 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
CHD8-214ENST00000557727 MTX1Q13505 466 aa11.33□□□□□ -0.6
CHD8-214ENST00000557727 DDX46Q7L014 1031 aaKnown RBP11.33□□□□□ -0.6
CHD8-214ENST00000557727 PPEF1O14829 653 aaPredicted RBP11.32□□□□□ -0.6
CHD8-214ENST00000557727 BBOX1O75936 387 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 GNAI3P08754 354 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
CHD8-214ENST00000557727 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 PSME4Q14997 1843 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
CHD8-214ENST00000557727 HRO43593 1189 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 MS4A1P11836 297 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.31□□□□□ -0.6
CHD8-214ENST00000557727 ZNF594Q96JF6 807 aaPredicted RBP11.31□□□□□ -0.6
CHD8-214ENST00000557727 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
CHD8-214ENST00000557727 LTBP3Q9NS15 1303 aa11.31□□□□□ -0.6
CHD8-214ENST00000557727 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 PNMA6EA0A0J9YXQ4 647 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
CHD8-214ENST00000557727 GNAI2P04899 355 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 PSEN2P49810 448 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 GPR162Q16538 588 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 KLHDC4Q8TBB5 520 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
CHD8-214ENST00000557727 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
CHD8-214ENST00000557727 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 GPSM2P81274 684 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 RASSF7Q02833 373 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 PTPN12Q05209 780 aaKnown RBP11.29□□□□□ -0.6
CHD8-214ENST00000557727 IFIT5Q13325 482 aaKnown RBP11.29□□□□□ -0.6
CHD8-214ENST00000557727 CEP85Q6P2H3 762 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
CHD8-214ENST00000557727 RTFDC1Q9BY42 306 aaPredicted RBP11.29□□□□□ -0.6
CHD8-214ENST00000557727 PUS3Q9BZE2 481 aaKnown RBP11.29□□□□□ -0.6
CHD8-214ENST00000557727 IRS2Q9Y4H2 1338 aa11.29□□□□□ -0.6
CHD8-214ENST00000557727 GRIN3BO60391 1043 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 SSH3Q8TE77 659 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 PSMD1Q99460 953 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 PODXL2Q9NZ53 605 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
CHD8-214ENST00000557727 ATP8B2P98198 1209 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
CHD8-214ENST00000557727 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms