RNA–Protein interactions for RNA: ENST00000557580.2

TTC8-215, Transcript of tetratricopeptide repeat domain 8, human

TSL 5

Gene TTC8, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TTC8-215	ENST00000557580		G3V3G9	751 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	EVI5	O60447	810 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	VIL1	P09327	827 aa	Known RBP	11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	SNRPA1	P09661	255 aa	Known RBP	11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	BMP8B	P34820	402 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	ZNF280A	P59817	542 aa	Predicted RBP	11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	LRIT3	Q3SXY7	679 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	SUSD4	Q5VX71	490 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	SH3TC2	Q8TF17	1288 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	MS4A4A	Q96JQ5	239 aa		11.25	□□□□□ -0.61
TTC8-215	ENST00000557580	BTBD11	A6QL63	1104 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	NBPF26	B4DH59	902 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	CAP1	Q01518	475 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	NBPF10	Q6P3W6	841 aa	Known RBP	11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	UBE2Q1	Q7Z7E8	422 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	IL17RE	Q8NFR9	667 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	SHISA4	Q96DD7	197 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	SLC10A4	Q96EP9	437 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	KCNQ5	Q9NR82	932 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	RAPGEFL1	Q9UHV5	662 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	RPTOR	Q8N122	1335 aa		11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.24	□□□□□ -0.61
TTC8-215	ENST00000557580	RIMBP2	O15034	1052 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	KCNQ3	O43525	872 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	ECE2	O60344	883 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	HMOX1	P09601	288 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	ZBTB48	P10074	688 aa	Predicted RBP	11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	GPT	P24298	496 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	LDLRAD1	Q5T700	205 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	TMC4	Q7Z404	712 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	PPP1R42	Q7Z4L9	355 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	SCAF8	Q9UPN6	1271 aa	Known RBP	11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	BOLA1	Q9Y3E2	137 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	RTL9	Q8NET4	1388 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	UBR2	Q8IWV8	1755 aa		11.23	□□□□□ -0.61
TTC8-215	ENST00000557580	GJA8	P48165	433 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	PRKG1	Q13976	671 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	DOK7	Q18PE1	504 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	SLC10A5	Q5PT55	438 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	DDX46	Q7L014	1031 aa	Known RBP	11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	AGBL3	Q8NEM8	1001 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	EYA3	Q99504	573 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	MYOZ2	Q9NPC6	264 aa		11.22	□□□□□ -0.61
TTC8-215	ENST00000557580	UBN2	Q6ZU65	1347 aa		11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	GNAT3	A8MTJ3	354 aa		11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	C6orf229	H3BNL8	230 aa		11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	NTSR2	O95665	410 aa		11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	GRAP	Q13588	217 aa		11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	GRAPL	Q8TC17	118 aa	Predicted RBP	11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	ANGEL1	Q9UNK9	670 aa	Known RBP	11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.21	□□□□□ -0.61
TTC8-215	ENST00000557580	UNC80	Q8N2C7	3258 aa		11.21	□□□□□ -0.62
TTC8-215	ENST00000557580	CENPF	P49454	3210 aa		11.21	□□□□□ -0.62
TTC8-215	ENST00000557580	MAP3K15	Q6ZN16	1313 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	POLR2A	P24928	1970 aa	Known RBP	11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	GJB1	P08034	283 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	USP17L8	P0C7I0	530 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	BCAM	P50895	628 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	MTFR1	Q15390	333 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	NGEF	Q8N5V2	710 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	GDF15	Q99988	308 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	LAMA3	Q16787	3333 aa		11.2	□□□□□ -0.62
TTC8-215	ENST00000557580	FARP2	O94887	1054 aa	Predicted RBP	11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	PRMT2	P55345	433 aa		11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	PARP10	Q53GL7	1025 aa		11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	KIF6	Q6ZMV9	814 aa		11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	ZNF34	Q8IZ26	560 aa		11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	WNK4	Q96J92	1243 aa		11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	RYDEN	Q9NUL5	291 aa	Known RBP	11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.19	□□□□□ -0.62
TTC8-215	ENST00000557580	TNFRSF10A	O00220	468 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	GNRH1	P01148	92 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	KIF22	Q14807	665 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	MORC1	Q86VD1	984 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	TDH	Q8IZJ6	230 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	GAS2L2	Q8NHY3	880 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	UTP14A	Q9BVJ6	771 aa	Known RBP	11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	ZFYVE28	Q9HCC9	887 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	POLL	Q9UGP5	575 aa		11.18	□□□□□ -0.62
TTC8-215	ENST00000557580	TMEM265	A0A087WTH1	108 aa		11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	TESPA1	A2RU30	521 aa	Predicted RBP	11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	UNCX	A6NJT0	531 aa		11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	NBPF9	Q3BBW0	867 aa		11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	GUCD1	Q96NT3	240 aa		11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	PTPN18	Q99952	460 aa		11.17	□□□□□ -0.62
TTC8-215	ENST00000557580	IRS2	Q9Y4H2	1338 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	MAP3K11	Q16584	847 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	GML	Q99445	158 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	RNF208	Q9H0X6	261 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	ZBTB3	Q9H5J0	574 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	VCAN	P13611	3396 aa		11.16	□□□□□ -0.62
TTC8-215	ENST00000557580	PPP1R12B	O60237	982 aa	Predicted RBP	11.15	□□□□□ -0.62
TTC8-215	ENST00000557580	WDHD1	O75717	1129 aa	Predicted RBP	11.15	□□□□□ -0.62
TTC8-215	ENST00000557580	CCL5	P13501	91 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms