RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PA2G4Q9UQ80 394 aaKnown RBP13.17□□□□□ -0.3
HNRNPC-232ENST00000557442 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 CIAO1O76071 339 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 CIAPIN1Q6FI81 312 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 TXNRD3Q86VQ6 643 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
HNRNPC-232ENST00000557442 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 KIF3CO14782 793 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 TNIP1Q15025 636 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 ATG9AQ7Z3C6 839 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 VGLL2Q8N8G2 317 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 IRS2Q9Y4H2 1338 aa13.15□□□□□ -0.3
HNRNPC-232ENST00000557442 PSMD14O00487 310 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 PDE8BO95263 885 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 LMOD1P29536 600 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 IL15P40933 162 aaPredicted RBP13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 CEP85Q6P2H3 762 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 TRPM7Q96QT4 1865 aa13.14□□□□□ -0.31
HNRNPC-232ENST00000557442 POTECB2RU33 542 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 SCNN1DP51172 638 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 ATP8B2P98198 1209 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 PODNQ7Z5L7 613 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 HACL1Q9UJ83 578 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 MYO5AQ9Y4I1 1855 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 GYG1P46976 350 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 POLA2Q14181 598 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 CEP126Q9P2H0 1117 aa13.13□□□□□ -0.31
HNRNPC-232ENST00000557442 ZNF609O15014 1411 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 USP17L3A6NCW0 530 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 USP17L4A6NCW7 530 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 SLC5A1P13866 664 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 EPHX2P34913 555 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 G3BP1Q13283 466 aaKnown RBP eCLIP13.12□□□□□ -0.314e-10■□□□□ 8.8
HNRNPC-232ENST00000557442 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 USP17L1Q7RTZ2 530 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 ZBTB12Q9Y330 459 aaPredicted RBP13.12□□□□□ -0.31
HNRNPC-232ENST00000557442 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 TOMM70O94826 608 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 FGFR2P21802 821 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 EPS15P42566 896 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 LPIN2Q92539 896 aa13.11□□□□□ -0.31
HNRNPC-232ENST00000557442 MYH2Q9UKX2 1941 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 HMMRO75330 724 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 SURF6O75683 361 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 VIL1P09327 827 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 IL1R1P14778 569 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 GTF2IP78347 998 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 TFCP2Q12800 502 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 RPAP2Q8IXW5 612 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
HNRNPC-232ENST00000557442 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 STRIP1Q5VSL9 837 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 RBM46Q8TBY0 533 aaKnown RBP13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 DPF2Q92785 391 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 CRBNQ96SW2 442 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 JAG2Q9Y219 1238 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
HNRNPC-232ENST00000557442 MAST2Q6P0Q8 1798 aa13.08□□□□□ -0.31
HNRNPC-232ENST00000557442 MYO3BQ8WXR4 1341 aa13.08□□□□□ -0.31
HNRNPC-232ENST00000557442 MYH7P12883 1935 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 H7C1D1 291 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 FRAT2O75474 233 aaPredicted RBP13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 POTEJP0CG39 1038 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 BCAMP50895 628 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 PPP4R3CPQ6ZMV5 832 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
HNRNPC-232ENST00000557442 PNMA8AQ86V59 439 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms