RNA–Protein interactions for RNA: ENST00000557440.1

LINC00639-205, long intergenic non-protein coding RNA 639, humanhuman

TSL 2

Gene LINC00639, Length 3,644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-205ENST00000557440 TRIM29Q14134 588 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 PHKBQ93100 1093 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 PYCARDQ9ULZ3 195 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
LINC00639-205ENST00000557440 GTF3C6Q969F1 213 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
LINC00639-205ENST00000557440 STOX1Q6ZVD7 989 aa16.09■□□□□ 0.17
LINC00639-205ENST00000557440 OSBP2Q969R2 916 aa16.09■□□□□ 0.17
LINC00639-205ENST00000557440 TULP1O00294 542 aaPredicted RBP16.09■□□□□ 0.17
LINC00639-205ENST00000557440 TDO2P48775 406 aa16.09■□□□□ 0.17
LINC00639-205ENST00000557440 SCARF1Q14162 830 aa16.09■□□□□ 0.17
LINC00639-205ENST00000557440 CPLX2Q6PUV4 134 aaKnown RBP16.09■□□□□ 0.17
LINC00639-205ENST00000557440 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
LINC00639-205ENST00000557440 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
LINC00639-205ENST00000557440 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
LINC00639-205ENST00000557440 AIFM3Q96NN9 605 aa16.09■□□□□ 0.17
LINC00639-205ENST00000557440 IGSF3O75054 1194 aa16.08■□□□□ 0.17
LINC00639-205ENST00000557440 CBX1P83916 185 aa16.08■□□□□ 0.17
LINC00639-205ENST00000557440 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.17
LINC00639-205ENST00000557440 B4E1Z4 1266 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 ITGA6P23229 1130 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 HAUS7Q99871 368 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 hCG_1642624A0A1W2PR95 340 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 M0R2C6 588 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 AOPEPQ8N6M6 819 aa16.08■□□□□ 0.16
LINC00639-205ENST00000557440 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 HOMER1Q86YM7 354 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 GREM2Q9H772 168 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 RGPD8O14715 1765 aaPredicted RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 IRS4O14654 1257 aaPredicted RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 GPAA1O43292 621 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 FGAP02671 866 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
LINC00639-205ENST00000557440 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 PUS7LQ9H0K6 701 aaKnown RBP16.07■□□□□ 0.16
LINC00639-205ENST00000557440 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 PDLIM2Q96JY6 352 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 MAST3O60307 1309 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 HLFQ16534 295 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 NAPBQ9H115 298 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
LINC00639-205ENST00000557440 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 CCAR2Q8N163 923 aaKnown RBP16.06■□□□□ 0.16
LINC00639-205ENST00000557440 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 AKAP2Q9Y2D5 859 aa16.06■□□□□ 0.16
LINC00639-205ENST00000557440 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
LINC00639-205ENST00000557440 LMOD1P29536 600 aaPredicted RBP16.05■□□□□ 0.16
LINC00639-205ENST00000557440 C3P01024 1663 aa16.05■□□□□ 0.16
LINC00639-205ENST00000557440 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
LINC00639-205ENST00000557440 SLC26A6Q9BXS9 759 aa16.05■□□□□ 0.16
LINC00639-205ENST00000557440 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
LINC00639-205ENST00000557440 MRVI1Q9Y6F6 885 aa16.05■□□□□ 0.16
LINC00639-205ENST00000557440 ADGRL3Q9HAR2 1447 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 AP5Z1O43299 807 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 MCM5P33992 734 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 HMGN5P82970 282 aaKnown RBP16.04■□□□□ 0.16
LINC00639-205ENST00000557440 HMGB1P09429 215 aaKnown RBP16.04■□□□□ 0.16
LINC00639-205ENST00000557440 TNNT1P13805 278 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
LINC00639-205ENST00000557440 UVSSAQ2YD98 709 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 DHX16O60231 1041 aaKnown RBP16.04■□□□□ 0.16
LINC00639-205ENST00000557440 CTDSPL2Q05D32 466 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 CEP57L1Q8IYX8 460 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 CCDC191Q8NCU4 936 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 NCOA7Q8NI08 942 aa16.04■□□□□ 0.16
LINC00639-205ENST00000557440 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 METAP2P50579 478 aaKnown RBP eCLIP16.03■□□□□ 0.16
LINC00639-205ENST00000557440 TMEM67Q5HYA8 995 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 NSUN7Q8NE18 718 aaKnown RBP16.03■□□□□ 0.16
LINC00639-205ENST00000557440 SLAIN2Q9P270 581 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 PRDM1O75626 825 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 DZIP3Q86Y13 1208 aaKnown RBP16.03■□□□□ 0.16
LINC00639-205ENST00000557440 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 ALG1Q9BT22 464 aa16.03■□□□□ 0.16
LINC00639-205ENST00000557440 EXOC5O00471 708 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 SERPINC1P01008 464 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 PDIA3P30101 505 aaKnown RBP16.02■□□□□ 0.16
LINC00639-205ENST00000557440 ERICH2A1L162 156 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 PHKA1P46020 1223 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 HS1BP3Q53T59 392 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 KLHL10Q6JEL2 608 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 C11orf57Q6ZUT1 292 aaPredicted RBP16.02■□□□□ 0.16
LINC00639-205ENST00000557440 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 ARMT1Q9H993 441 aa16.02■□□□□ 0.16
LINC00639-205ENST00000557440 ZNF609O15014 1411 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms