RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
HNRNPC-227ENST00000556897 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
HNRNPC-227ENST00000556897 MXD3Q9BW11 206 aa11.69□□□□□ -0.54
HNRNPC-227ENST00000556897 CWC25Q9NXE8 425 aaPredicted RBP11.69□□□□□ -0.54
HNRNPC-227ENST00000556897 PSME4Q14997 1843 aa11.69□□□□□ -0.54
HNRNPC-227ENST00000556897 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
HNRNPC-227ENST00000556897 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
HNRNPC-227ENST00000556897 ADAMTS8Q9UP79 889 aa11.68□□□□□ -0.54
HNRNPC-227ENST00000556897 ZNF853P0CG23 659 aa11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 DACT2Q5SW24 774 aa11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 OGFOD1Q8N543 542 aa11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
HNRNPC-227ENST00000556897 GPR25O00155 361 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 WNT10BO00744 389 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 SASH1O94885 1247 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 TM4SF4P48230 202 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 CTSWP56202 376 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 MINPP1Q9UNW1 487 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 MED23Q9ULK4 1368 aa11.66□□□□□ -0.54
HNRNPC-227ENST00000556897 DDX58O95786 925 aaKnown RBP11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 NF2P35240 595 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 PRKG1Q13976 671 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 STRIP1Q5VSL9 837 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 C8orf58Q8NAV2 365 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 R3HDMLQ9H3Y0 253 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 GREM2Q9H772 168 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 BSDC1Q9NW68 430 aaPredicted RBP11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 IFT57Q9NWB7 429 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
HNRNPC-227ENST00000556897 MYO3BQ8WXR4 1341 aa11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 GNAI1P63096 354 aa11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 SREBF2Q12772 1141 aa11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 NOM1Q5C9Z4 860 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 TXNRD3Q86VQ6 643 aa11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
HNRNPC-227ENST00000556897 MKI67P46013 3256 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 APAF1O14727 1248 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 FKTNO75072 461 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 KLRK1P26718 216 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 DDX10Q13206 875 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 CCDC30Q5VVM6 783 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 KIAA0825Q8IV33 1275 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
HNRNPC-227ENST00000556897 PI4KAP2A4QPH2 592 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 CALD1Q05682 793 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 TTLL5Q6EMB2 1281 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 APOBEC3FQ8IUX4 373 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 PI4KAP1Q8N8J0 262 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 CFHR5Q9BXR6 569 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 ANGEL1Q9UNK9 670 aaKnown RBP11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 FZD1Q9UP38 647 aa11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 ZNF646O15015 1829 aaPredicted RBP11.62□□□□□ -0.55
HNRNPC-227ENST00000556897 CENPFP49454 3210 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 LDLRAD1Q5T700 205 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 UBE3BQ7Z3V4 1068 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 LEMD3Q9Y2U8 911 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 HTTP42858 3142 aa11.61□□□□□ -0.55
HNRNPC-227ENST00000556897 ZNF804BA4D1E1 1349 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 MYH3P11055 1940 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 BRCA2P51587 3418 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 NEURL1BA8MQ27 555 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 ALDH1A1P00352 501 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 ATXN8OSP0DMR3 200 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 MMP14P50281 582 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 GTF2IP78347 998 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 NEXNQ0ZGT2 675 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 DEFB129Q9H1M3 183 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 KIAA0100Q14667 2235 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-227ENST00000556897 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 ITGA6P23229 1130 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 IFNL1Q8IU54 200 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 SLC10A4Q96EP9 437 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 MPHOSPH8Q99549 860 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 ANKRD2Q9GZV1 360 aa11.59□□□□□ -0.55
HNRNPC-227ENST00000556897 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 H7C1W4 665 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 IGF2BP3O00425 579 aaKnown RBP eCLIP11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 MYCNP04198 464 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 KCNJ4P48050 445 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 OTOP1Q7RTM1 612 aa11.58□□□□□ -0.56
HNRNPC-227ENST00000556897 CERS5Q8N5B7 392 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms