RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 RLBP1P12271 317 aa13.17□□□□□ -0.3
MTHFD1-214ENST00000556771 RFX5P48382 616 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-214ENST00000556771 UBE4AQ14139 1066 aa13.17□□□□□ -0.3
MTHFD1-214ENST00000556771 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
MTHFD1-214ENST00000556771 ZNF609O15014 1411 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 POTECB2RU33 542 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 EYA2O00167 538 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 RAD17O75943 681 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 FSTL1Q12841 308 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
MTHFD1-214ENST00000556771 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 TAF5LO75529 589 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 EPHX2P34913 555 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 SMC1BQ8NDV3 1235 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 DPF2Q92785 391 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 COPRSQ9NQ92 184 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 GPRC5DQ9NZD1 345 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 PSME4Q14997 1843 aa13.15□□□□□ -0.3
MTHFD1-214ENST00000556771 PSMD14O00487 310 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 PLIN1O60240 522 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 PDE8BO95263 885 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 VIL1P09327 827 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 SCNN1DP51172 638 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 VGLL2Q8N8G2 317 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
MTHFD1-214ENST00000556771 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 SCN9AQ15858 1988 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 IL15P40933 162 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 MMP14P50281 582 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 PUM3Q15397 648 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 STRIP1Q5VSL9 837 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 TXNRD3Q86VQ6 643 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 LDHDQ86WU2 507 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 KLHDC4Q8TBB5 520 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 MYO3BQ8WXR4 1341 aa13.13□□□□□ -0.31
MTHFD1-214ENST00000556771 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 H7C1D1 291 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 KLRK1P26718 216 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 RSBN1LQ6PCB5 846 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 CD209Q9NNX6 404 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
MTHFD1-214ENST00000556771 IFIT1P09914 478 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 IL1R1P14778 569 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 EPS15P42566 896 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 LPIN2Q92539 896 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 SIL1Q9H173 461 aa13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-214ENST00000556771 ADAMTSL1Q8N6G6 1762 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 SNAP23O00161 211 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 SLC5A1P13866 664 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 FGFR2P21802 821 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 KCNQ5Q9NR82 932 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 PA2G4Q9UQ80 394 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 COG6Q9Y2V7 657 aa13.1□□□□□ -0.31
MTHFD1-214ENST00000556771 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 GMLQ99445 158 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 AKAP2Q9Y2D5 859 aa13.09□□□□□ -0.31
MTHFD1-214ENST00000556771 SASH1O94885 1247 aa13.08□□□□□ -0.32
MTHFD1-214ENST00000556771 HSPA6P17066 643 aa13.08□□□□□ -0.32
MTHFD1-214ENST00000556771 ZNF280AP59817 542 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-214ENST00000556771 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.323e-7■■□□□ 13.3
MTHFD1-214ENST00000556771 ATP2B3Q16720 1220 aa13.08□□□□□ -0.32
MTHFD1-214ENST00000556771 CEP85Q6P2H3 762 aa13.08□□□□□ -0.32
MTHFD1-214ENST00000556771 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms