RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 ITGBL1O95965 494 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-216ENST00000556066 EPS15P42566 896 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 CTCFP49711 727 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-216ENST00000556066 SCNN1DP51172 638 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 MYD88Q99836 296 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 WBP1LQ9NX94 342 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 TRPM7Q96QT4 1865 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 LRRC37AA6NMS7 1700 aa8.63□□□□□ -1.03
PSEN1-216ENST00000556066 RAD17O75943 681 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 LBX1P52954 281 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 CXCL9Q07325 125 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 CCDC30Q5VVM6 783 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-216ENST00000556066 CELF1Q92879 486 aaKnown RBP8.62□□□□□ -1.03
PSEN1-216ENST00000556066 TSR2Q969E8 191 aaKnown RBP8.62□□□□□ -1.03
PSEN1-216ENST00000556066 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 RTFDC1Q9BY42 306 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-216ENST00000556066 VPS33BQ9H267 617 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 NSFL1CQ9UNZ2 370 aaKnown RBP8.62□□□□□ -1.03
PSEN1-216ENST00000556066 MYH3P11055 1940 aa8.62□□□□□ -1.03
PSEN1-216ENST00000556066 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 DDX58O95786 925 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 GMPSP49915 693 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 KIAA2012Q0VF49 1180 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 TRIM28Q13263 835 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 SF3B3Q15393 1217 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 WASHC4Q2M389 1173 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 ZBTB38Q8NAP3 1195 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 MRS2Q9HD23 443 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 GPRC5DQ9NZD1 345 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 ABT1Q9ULW3 272 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 COL4A1P02462 1669 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
PSEN1-216ENST00000556066 DUOX1Q9NRD9 1551 aa8.61□□□□□ -1.03
PSEN1-216ENST00000556066 TRAF5O00463 557 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 ANP32CO43423 234 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 HSPA8P11142 646 aaKnown RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 HSP90B1P14625 803 aaKnown RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 RPS8P62241 208 aaKnown RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 GPSM2P81274 684 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 NBR1Q14596 966 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 TNIP1Q15025 636 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 E2F4Q16254 413 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 CCDC191Q8NCU4 936 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 STK31Q9BXU1 1019 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 DBNDD1Q9H9R9 158 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 SEC31BQ9NQW1 1179 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 ADARB2Q9NS39 739 aaKnown RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 CWC25Q9NXE8 425 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-216ENST00000556066 MAP3K2Q9Y2U5 619 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
PSEN1-216ENST00000556066 PI4KAP2A4QPH2 592 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 YDJCA8MPS7 323 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 PCCAP05165 728 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-216ENST00000556066 GRM1Q13255 1194 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 DEFB115Q30KQ5 88 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 CCDC152Q4G0S7 254 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 PI4KAP1Q8N8J0 262 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 GPR101Q96P66 508 aaPredicted RBP8.59□□□□□ -1.03
PSEN1-216ENST00000556066 ANKIB1Q9P2G1 1089 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 POLLQ9UGP5 575 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 PDE4DIPQ5VU43 2346 aa8.59□□□□□ -1.03
PSEN1-216ENST00000556066 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 RASSF10A6NK89 507 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 PDE8AO60658 829 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 NEXNQ0ZGT2 675 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 TWISTNBQ3B726 338 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-216ENST00000556066 KSR2Q6VAB6 950 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 KHSRPQ92945 711 aaKnown RBP eCLIP8.58□□□□□ -1.041e-7■■■■□ 24
PSEN1-216ENST00000556066 EYA3Q99504 573 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 CNOT7Q9UIV1 285 aaKnown RBP8.58□□□□□ -1.04
PSEN1-216ENST00000556066 SCN9AQ15858 1988 aa8.58□□□□□ -1.04
PSEN1-216ENST00000556066 H7C1D1 291 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 PSMD14O00487 310 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 ECE2O60344 883 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 UFL1O94874 794 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 NUDT7P0C024 238 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 RGS19P49795 217 aa8.57□□□□□ -1.04
PSEN1-216ENST00000556066 CWF19L2Q2TBE0 894 aaKnown RBP8.57□□□□□ -1.04
PSEN1-216ENST00000556066 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
PSEN1-216ENST00000556066 G2E3Q7L622 706 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms