RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 DDX54Q8TDD1 881 aaKnown RBP7.5□□□□□ -1.21
ATXN3-230ENST00000554673 THAP11Q96EK4 314 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 ZBTB40Q9NUA8 1239 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 CHPF2Q9P2E5 772 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 SPATA31A6Q5VVP1 1343 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 PCDH11XQ9BZA7 1347 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 PCDH11YQ9BZA8 1340 aa7.5□□□□□ -1.21
ATXN3-230ENST00000554673 SCN7AQ01118 1682 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 BTBD11A6QL63 1104 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 J3QL48 77 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 ATP6V1AP38606 617 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 RFC5P40937 340 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
ATXN3-230ENST00000554673 MVPQ14764 893 aaKnown RBP7.49□□□□□ -1.21
ATXN3-230ENST00000554673 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 SNIP1Q8TAD8 396 aaKnown RBP7.49□□□□□ -1.21
ATXN3-230ENST00000554673 NLRP7Q8WX94 980 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 KAZALD1Q96I82 304 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 MEIS3Q99687 375 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 FAM217BQ9NTX9 383 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-230ENST00000554673 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 BABAM1Q9NWV8 329 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 SPG7Q9UQ90 795 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 EP400Q96L91 3159 aa7.49□□□□□ -1.21
ATXN3-230ENST00000554673 PATL2C9JE40 543 aaKnown RBP7.48□□□□□ -1.21
ATXN3-230ENST00000554673 PDE4CQ08493 712 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 ITPK1Q13572 414 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 COL24A1Q17RW2 1714 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 ERICH6BQ5W0A0 696 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 INTS3Q68E01 1043 aaKnown RBP7.48□□□□□ -1.21
ATXN3-230ENST00000554673 DZIP1LQ8IYY4 767 aaKnown RBP7.48□□□□□ -1.21
ATXN3-230ENST00000554673 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 SENP2Q9HC62 589 aa7.48□□□□□ -1.21
ATXN3-230ENST00000554673 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-230ENST00000554673 WNT7AO00755 349 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 SOCS7O14512 581 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 IGKV5-2P06315 115 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 CLK2P49760 499 aaKnown RBP7.47□□□□□ -1.21
ATXN3-230ENST00000554673 KCNQ4P56696 695 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 EVA1CP58658 441 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 C1orf141Q5JVX7 400 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 PPP2R2DQ66LE6 453 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 DNAJC10Q8IXB1 793 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 RTF1Q92541 710 aaKnown RBP7.47□□□□□ -1.21
ATXN3-230ENST00000554673 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 SPEF2Q9C093 1822 aa7.47□□□□□ -1.21
ATXN3-230ENST00000554673 MYH3P11055 1940 aa7.46□□□□□ -1.21
ATXN3-230ENST00000554673 ERVV-2B6SEH9 535 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 A1BGP04217 495 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 EIF2S2P20042 333 aaKnown RBP7.46□□□□□ -1.22
ATXN3-230ENST00000554673 CALD1Q05682 793 aaKnown RBP7.46□□□□□ -1.22
ATXN3-230ENST00000554673 KCNA1Q09470 495 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 TRIM32Q13049 653 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 TTLL7Q6ZT98 887 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 MTMR14Q8NCE2 650 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 ARHGAP45Q92619 1136 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 HPS1Q92902 700 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 ACSBG1Q96GR2 724 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 TNRC6CQ9HCJ0 1690 aaKnown RBP7.46□□□□□ -1.22
ATXN3-230ENST00000554673 KIF16BQ96L93 1317 aa7.46□□□□□ -1.22
ATXN3-230ENST00000554673 CASP7P55210 303 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 TEFQ10587 303 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 TMEM259Q4ZIN3 620 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 EPHA10Q5JZY3 1008 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 BEND3Q5T5X7 828 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 HDGFL1Q5TGJ6 251 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 POTEAQ6S8J7 498 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 NGLY1Q96IV0 654 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 USP44Q9H0E7 712 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 USP21Q9UK80 565 aa7.45□□□□□ -1.22
ATXN3-230ENST00000554673 PTCD1O75127 700 aaKnown RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 BRD1O95696 1058 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 NEFMP07197 916 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 HOXB7P09629 217 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 CYP19A1P11511 503 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 CABP4P57796 275 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 INTS5Q6P9B9 1019 aaKnown RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 JARID2Q92833 1246 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 GJD4Q96KN9 370 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 GDPD2Q9HCC8 539 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 USTQ9Y2C2 406 aa7.44□□□□□ -1.22
ATXN3-230ENST00000554673 THRAP3Q9Y2W1 955 aaKnown RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 MYO5AQ9Y4I1 1855 aaKnown RBP7.44□□□□□ -1.22
ATXN3-230ENST00000554673 ANKRD31Q8N7Z5 1873 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 LRP5O75197 1615 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 PNMA6EA0A0J9YXQ4 647 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 NEFLP07196 543 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 NBPF7P0C2Y1 421 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-230ENST00000554673 GCGRP47871 477 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 CWF19L2Q2TBE0 894 aaKnown RBP7.43□□□□□ -1.22
ATXN3-230ENST00000554673 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 CCDC24Q8N4L8 307 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-230ENST00000554673 SLC16A10Q8TF71 515 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 XAGE3Q8WTP9 111 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms