RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 SCARF1Q14162 830 aa12.65□□□□□ -0.38
PTPN21-204ENST00000554178 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
PTPN21-204ENST00000554178 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
PTPN21-204ENST00000554178 PNNQ9H307 717 aaKnown RBP12.65□□□□□ -0.38
PTPN21-204ENST00000554178 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
PTPN21-204ENST00000554178 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
PTPN21-204ENST00000554178 TBC1D8O95759 1140 aa12.64□□□□□ -0.39
PTPN21-204ENST00000554178 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
PTPN21-204ENST00000554178 MXD3Q9BW11 206 aa12.64□□□□□ -0.39
PTPN21-204ENST00000554178 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
PTPN21-204ENST00000554178 HTTP42858 3142 aa12.64□□□□□ -0.39
PTPN21-204ENST00000554178 ZSWIM8A7E2V4 1837 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 WTIPA6NIX2 430 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 MAP3K13O43283 966 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 RSBN1LQ6PCB5 846 aaPredicted RBP12.63□□□□□ -0.39
PTPN21-204ENST00000554178 MYD88Q99836 296 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
PTPN21-204ENST00000554178 ZNF609O15014 1411 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 CHL1O00533 1208 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 NUBP1P53384 320 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 PRKG1Q13976 671 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
PTPN21-204ENST00000554178 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
PTPN21-204ENST00000554178 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
PTPN21-204ENST00000554178 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
PTPN21-204ENST00000554178 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
PTPN21-204ENST00000554178 ELL2O00472 640 aaPredicted RBP12.61□□□□□ -0.39
PTPN21-204ENST00000554178 SASH1O94885 1247 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
PTPN21-204ENST00000554178 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 NBPF9Q3BBW0 867 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
PTPN21-204ENST00000554178 CENPFP49454 3210 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 USP17L8P0C7I0 530 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 MBIPQ9NS73 344 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 PODXL2Q9NZ53 605 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 XDHP47989 1333 aa12.6□□□□□ -0.39
PTPN21-204ENST00000554178 KIAA0100Q14667 2235 aaKnown RBP12.6□□□□□ -0.39
PTPN21-204ENST00000554178 MKI67P46013 3256 aaKnown RBP12.59□□□□□ -0.39
PTPN21-204ENST00000554178 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
PTPN21-204ENST00000554178 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
PTPN21-204ENST00000554178 AGBL3Q8NEM8 1001 aa12.59□□□□□ -0.39
PTPN21-204ENST00000554178 GMLQ99445 158 aa12.59□□□□□ -0.39
PTPN21-204ENST00000554178 R3HDMLQ9H3Y0 253 aa12.59□□□□□ -0.39
PTPN21-204ENST00000554178 HYPKQ9NX55 129 aa12.59□□□□□ -0.39
PTPN21-204ENST00000554178 USP17L3A6NCW0 530 aa12.58□□□□□ -0.4
PTPN21-204ENST00000554178 USP17L4A6NCW7 530 aa12.58□□□□□ -0.4
PTPN21-204ENST00000554178 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
PTPN21-204ENST00000554178 USP17L1Q7RTZ2 530 aa12.58□□□□□ -0.4
PTPN21-204ENST00000554178 ANKRD18AQ8IVF6 992 aa12.58□□□□□ -0.4
PTPN21-204ENST00000554178 PITPNM2Q9BZ72 1349 aa12.58□□□□□ -0.4
PTPN21-204ENST00000554178 SSC5DA1L4H1 1573 aa12.57□□□□□ -0.4
PTPN21-204ENST00000554178 PDE8AO60658 829 aa12.57□□□□□ -0.4
PTPN21-204ENST00000554178 KLRK1P26718 216 aa12.57□□□□□ -0.4
PTPN21-204ENST00000554178 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTPN21-204ENST00000554178 RUNDC1Q96C34 613 aa12.57□□□□□ -0.4
PTPN21-204ENST00000554178 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
PTPN21-204ENST00000554178 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
PTPN21-204ENST00000554178 GPR25O00155 361 aa12.56□□□□□ -0.4
PTPN21-204ENST00000554178 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
PTPN21-204ENST00000554178 HOXB7P09629 217 aa12.56□□□□□ -0.4
PTPN21-204ENST00000554178 FKBP1BP68106 108 aa12.56□□□□□ -0.4
PTPN21-204ENST00000554178 CWC25Q9NXE8 425 aaPredicted RBP12.56□□□□□ -0.4
PTPN21-204ENST00000554178 MYH13Q9UKX3 1938 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 WNT10BO00744 389 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 ATP2B4P23634 1241 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 CTSWP56202 376 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
PTPN21-204ENST00000554178 DACT2Q5SW24 774 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 GREM2Q9H772 168 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 CACNA1FO60840 1977 aa12.55□□□□□ -0.4
PTPN21-204ENST00000554178 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
PTPN21-204ENST00000554178 NF2P35240 595 aa12.54□□□□□ -0.4
PTPN21-204ENST00000554178 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
PTPN21-204ENST00000554178 FBXO46Q6PJ61 603 aaPredicted RBP12.54□□□□□ -0.4
PTPN21-204ENST00000554178 KIAA0825Q8IV33 1275 aa12.54□□□□□ -0.4
PTPN21-204ENST00000554178 BMP2KQ9NSY1 1161 aaPredicted RBP12.54□□□□□ -0.4
PTPN21-204ENST00000554178 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
PTPN21-204ENST00000554178 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
PTPN21-204ENST00000554178 BRCA2P51587 3418 aa12.53□□□□□ -0.4
PTPN21-204ENST00000554178 FKTNO75072 461 aa12.53□□□□□ -0.4
PTPN21-204ENST00000554178 RALBP1Q15311 655 aa12.53□□□□□ -0.4
PTPN21-204ENST00000554178 CWF19L2Q2TBE0 894 aaKnown RBP12.53□□□□□ -0.4
PTPN21-204ENST00000554178 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
PTPN21-204ENST00000554178 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
PTPN21-204ENST00000554178 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms