RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CDC5LQ99459 802 aaKnown RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 STK31Q9BXU1 1019 aa11.34□□□□□ -0.59
TDP1-208ENST00000553989 MAP3K2Q9Y2U5 619 aa11.34□□□□□ -0.59
TDP1-208ENST00000553989 ASTN2O75129 1339 aaPredicted RBP11.34□□□□□ -0.59
TDP1-208ENST00000553989 ATP2B4P23634 1241 aa11.33□□□□□ -0.6
TDP1-208ENST00000553989 CTSWP56202 376 aa11.33□□□□□ -0.6
TDP1-208ENST00000553989 KIF23Q02241 960 aaPredicted RBP11.33□□□□□ -0.6
TDP1-208ENST00000553989 SCARF1Q14162 830 aa11.33□□□□□ -0.6
TDP1-208ENST00000553989 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
TDP1-208ENST00000553989 CASP8AP2Q9UKL3 1982 aa11.33□□□□□ -0.6
TDP1-208ENST00000553989 SCN9AQ15858 1988 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 FAM155AB1AL88 458 aaPredicted RBP11.32□□□□□ -0.6
TDP1-208ENST00000553989 TRPA1O75762 1119 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 MYOZ2Q9NPC6 264 aa11.32□□□□□ -0.6
TDP1-208ENST00000553989 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 SLC10A3P09131 477 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
TDP1-208ENST00000553989 TTLL12Q14166 644 aaPredicted RBP11.31□□□□□ -0.6
TDP1-208ENST00000553989 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 PODNQ7Z5L7 613 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 TSR2Q969E8 191 aaKnown RBP11.31□□□□□ -0.6
TDP1-208ENST00000553989 SAGE1Q9NXZ1 904 aa11.31□□□□□ -0.6
TDP1-208ENST00000553989 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
TDP1-208ENST00000553989 IGHMBP2P38935 993 aaKnown RBP11.3□□□□□ -0.6
TDP1-208ENST00000553989 CWF19L2Q2TBE0 894 aaKnown RBP11.3□□□□□ -0.6
TDP1-208ENST00000553989 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
TDP1-208ENST00000553989 GREM2Q9H772 168 aa11.3□□□□□ -0.6
TDP1-208ENST00000553989 RNF186Q9NXI6 227 aa11.3□□□□□ -0.6
TDP1-208ENST00000553989 SCAF8Q9UPN6 1271 aaKnown RBP11.3□□□□□ -0.6
TDP1-208ENST00000553989 MED23Q9ULK4 1368 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 ZNF609O15014 1411 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 ANP32CO43423 234 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 NF2P35240 595 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 KCNJ4P48050 445 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
TDP1-208ENST00000553989 FKBP1BP68106 108 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 TTLL11Q8NHH1 800 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 BSDC1Q9NW68 430 aaPredicted RBP11.29□□□□□ -0.6
TDP1-208ENST00000553989 MINPP1Q9UNW1 487 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 PITPNM2Q9BZ72 1349 aa11.29□□□□□ -0.6
TDP1-208ENST00000553989 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 RGS19P49795 217 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 TWISTNBQ3B726 338 aaPredicted RBP11.28□□□□□ -0.6
TDP1-208ENST00000553989 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
TDP1-208ENST00000553989 BBXQ8WY36 941 aaPredicted RBP11.28□□□□□ -0.6
TDP1-208ENST00000553989 CSRNP1Q96S65 589 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
TDP1-208ENST00000553989 MYO3BQ8WXR4 1341 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
TDP1-208ENST00000553989 WTIPA6NIX2 430 aaPredicted RBP11.27□□□□□ -0.61
TDP1-208ENST00000553989 SOX10P56693 466 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
TDP1-208ENST00000553989 NBPF9Q3BBW0 867 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 MOB2Q70IA6 237 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 GMLQ99445 158 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 COA1Q9GZY4 146 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 PSME4Q14997 1843 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.61
TDP1-208ENST00000553989 UBE2Q2LH0YL09 131 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 SASH1O94885 1247 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 ITGA6P23229 1130 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
TDP1-208ENST00000553989 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 STRIP1Q5VSL9 837 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 G2E3Q7L622 706 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 CTU1Q7Z7A3 348 aaKnown RBP11.26□□□□□ -0.61
TDP1-208ENST00000553989 ANKRD2Q9GZV1 360 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 CHMP3Q9Y3E7 222 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 MYH3P11055 1940 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 ZNF804BA4D1E1 1349 aa11.26□□□□□ -0.61
TDP1-208ENST00000553989 WNT10BO00744 389 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 FLIIQ13045 1269 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 PRKG1Q13976 671 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 GCKRQ14397 625 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 KIAA0825Q8IV33 1275 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
TDP1-208ENST00000553989 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 H7C1W4 665 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 KLRK1P26718 216 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 GTF2IP78347 998 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 ARMC9Q7Z3E5 817 aa11.24□□□□□ -0.61
TDP1-208ENST00000553989 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms