RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 MMP14P50281 582 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 ZNF804AQ7Z570 1209 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 PNMA8AQ86V59 439 aaPredicted RBP11.61□□□□□ -0.55
CHD8-206ENST00000553870 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
CHD8-206ENST00000553870 RBM46Q8TBY0 533 aaKnown RBP11.61□□□□□ -0.55
CHD8-206ENST00000553870 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 CEP126Q9P2H0 1117 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 GJA3Q9Y6H8 435 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 COL4A5P29400 1685 aa11.61□□□□□ -0.55
CHD8-206ENST00000553870 USP17L3A6NCW0 530 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 USP17L4A6NCW7 530 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 WTIPA6NIX2 430 aaPredicted RBP11.6□□□□□ -0.55
CHD8-206ENST00000553870 PSMD14O00487 310 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 RAD17O75943 681 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 POLA2Q14181 598 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 USP17L1Q7RTZ2 530 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 ATG9AQ7Z3C6 839 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 TXNRD3Q86VQ6 643 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 VGLL2Q8N8G2 317 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 AGBL3Q8NEM8 1001 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 KLHDC4Q8TBB5 520 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 GPR101Q96P66 508 aaPredicted RBP11.6□□□□□ -0.55
CHD8-206ENST00000553870 CD209Q9NNX6 404 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 ZBTB40Q9NUA8 1239 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 IRS2Q9Y4H2 1338 aa11.6□□□□□ -0.55
CHD8-206ENST00000553870 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
CHD8-206ENST00000553870 IL1R1P14778 569 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 FSTL1Q12841 308 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 G3BP1Q13283 466 aaKnown RBP eCLIP11.59□□□□□ -0.554e-7■■■■□ 19.3
CHD8-206ENST00000553870 PUM3Q15397 648 aaKnown RBP11.59□□□□□ -0.55
CHD8-206ENST00000553870 CAVIN4Q5BKX8 364 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 LPIN2Q92539 896 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 TAF1DQ9H5J8 278 aaPredicted RBP11.59□□□□□ -0.55
CHD8-206ENST00000553870 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 AKAP2Q9Y2D5 859 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 MYO3BQ8WXR4 1341 aa11.59□□□□□ -0.55
CHD8-206ENST00000553870 PNMA6EA0A0J9YXQ4 647 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 H7C1D1 291 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 ZBTB22O15209 634 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 SASH1O94885 1247 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 FGFR2P21802 821 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 HIBADHP31937 336 aaKnown RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 EPHX2P34913 555 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 GMPSP49915 693 aaPredicted RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 SCNN1DP51172 638 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 TTLL5Q6EMB2 1281 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 RSBN1LQ6PCB5 846 aaPredicted RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 USP50Q70EL3 339 aaPredicted RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 FBXO33Q7Z6M2 555 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 SIL1Q9H173 461 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 KCNQ5Q9NR82 932 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 CNOT7Q9UIV1 285 aaKnown RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 PA2G4Q9UQ80 394 aaKnown RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
CHD8-206ENST00000553870 ZNF609O15014 1411 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 SCN4AP35499 1836 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
CHD8-206ENST00000553870 SNAP23O00161 211 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 HMMRO75330 724 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 SLC5A1P13866 664 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 FKBP1AP62942 108 aaKnown RBP11.57□□□□□ -0.56
CHD8-206ENST00000553870 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 CEP85Q6P2H3 762 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 LDHDQ86WU2 507 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 VPS37DQ86XT2 251 aa11.57□□□□□ -0.56
CHD8-206ENST00000553870 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
CHD8-206ENST00000553870 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
CHD8-206ENST00000553870 KLRK1P26718 216 aa11.56□□□□□ -0.56
CHD8-206ENST00000553870 EPS15P42566 896 aa11.56□□□□□ -0.56
CHD8-206ENST00000553870 AAMPQ13685 434 aa11.56□□□□□ -0.56
CHD8-206ENST00000553870 HSP90AB4PQ58FF6 505 aa11.56□□□□□ -0.56
CHD8-206ENST00000553870 ZC3H15Q8WU90 426 aaKnown RBP11.56□□□□□ -0.56
CHD8-206ENST00000553870 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
CHD8-206ENST00000553870 GNL3LQ9NVN8 582 aaKnown RBP11.56□□□□□ -0.56
CHD8-206ENST00000553870 SURF6O75683 361 aaKnown RBP11.55□□□□□ -0.56
CHD8-206ENST00000553870 USP17L8P0C7I0 530 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 HOXD11P31277 338 aaPredicted RBP11.55□□□□□ -0.56
CHD8-206ENST00000553870 GYG1P46976 350 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 ATP2B3Q16720 1220 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 DACT2Q5SW24 774 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 GMLQ99445 158 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 GPR108Q9NPR9 543 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 ZBTB12Q9Y330 459 aaPredicted RBP11.55□□□□□ -0.56
CHD8-206ENST00000553870 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
CHD8-206ENST00000553870 ZNF280AP59817 542 aaPredicted RBP11.54□□□□□ -0.56
CHD8-206ENST00000553870 GTF2IP78347 998 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 TFCP2Q12800 502 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 ERC1Q8IUD2 1116 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 OGFOD1Q8N543 542 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 PGAP2Q9UHJ9 254 aa11.54□□□□□ -0.56
CHD8-206ENST00000553870 SEMA3EO15041 775 aa11.53□□□□□ -0.56
CHD8-206ENST00000553870 FRAT2O75474 233 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms