RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-208ENST00000553846 MAPK8IP3Q9UPT6 1336 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 NEFMP07197 916 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
PRKCH-208ENST00000553846 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 MYH3P11055 1940 aa11.88□□□□□ -0.51
PRKCH-208ENST00000553846 SASH1O94885 1247 aa11.87□□□□□ -0.51
PRKCH-208ENST00000553846 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
PRKCH-208ENST00000553846 EN2P19622 333 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-208ENST00000553846 RIPK4P57078 832 aa11.87□□□□□ -0.51
PRKCH-208ENST00000553846 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
PRKCH-208ENST00000553846 CCER1Q8TC90 406 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-208ENST00000553846 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
PRKCH-208ENST00000553846 COLQQ9Y215 455 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-208ENST00000553846 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-208ENST00000553846 PCCAP05165 728 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-208ENST00000553846 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-208ENST00000553846 ATP2B4P23634 1241 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 GJA5P36382 358 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 STRIP1Q5VSL9 837 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 TXNRD3Q86VQ6 643 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 DBF4Q9UBU7 674 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-208ENST00000553846 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 A0A1B0GUL6 1792 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 IRS2Q9Y4H2 1338 aa11.86□□□□□ -0.51
PRKCH-208ENST00000553846 CRHR2Q13324 411 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 APOBEC3FQ8IUX4 373 aaKnown RBP11.85□□□□□ -0.51
PRKCH-208ENST00000553846 WNK4Q96J92 1243 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 PTPN18Q99952 460 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
PRKCH-208ENST00000553846 UNC80Q8N2C7 3258 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 ZSWIM8A7E2V4 1837 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 TESPA1A2RU30 521 aaPredicted RBP11.84□□□□□ -0.51
PRKCH-208ENST00000553846 PDE8AO60658 829 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 NF2P35240 595 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 MMP14P50281 582 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 INHBEP58166 350 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 TTLL12Q14166 644 aaPredicted RBP11.84□□□□□ -0.51
PRKCH-208ENST00000553846 CD99L2Q8TCZ2 262 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 PNNQ9H307 717 aaKnown RBP11.84□□□□□ -0.51
PRKCH-208ENST00000553846 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
PRKCH-208ENST00000553846 UNCXA6NJT0 531 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 KLRK1P26718 216 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 PRKG1Q13976 671 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 CCDC191Q8NCU4 936 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 COA1Q9GZY4 146 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 ANGEL1Q9UNK9 670 aaKnown RBP11.83□□□□□ -0.52
PRKCH-208ENST00000553846 AOX1Q06278 1338 aa11.83□□□□□ -0.52
PRKCH-208ENST00000553846 G3V3G9 751 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 CTSWP56202 376 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 DCAF8Q5TAQ9 597 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 OGFOD1Q8N543 542 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 JARID2Q92833 1246 aaPredicted RBP11.82□□□□□ -0.52
PRKCH-208ENST00000553846 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
PRKCH-208ENST00000553846 DEFB129Q9H1M3 183 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 PRO3102Q9H379 93 aa11.82□□□□□ -0.52
PRKCH-208ENST00000553846 PHAXQ9H814 394 aaKnown RBP11.82□□□□□ -0.52
PRKCH-208ENST00000553846 BSDC1Q9NW68 430 aaPredicted RBP11.82□□□□□ -0.52
PRKCH-208ENST00000553846 H0YGN5 161 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
PRKCH-208ENST00000553846 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
PRKCH-208ENST00000553846 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 GREM2Q9H772 168 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 PCDHAC2Q9Y5I4 1007 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 ZNF804BA4D1E1 1349 aa11.81□□□□□ -0.52
PRKCH-208ENST00000553846 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 KIAA0825Q8IV33 1275 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 SLC10A4Q96EP9 437 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 MS4A4AQ96JQ5 239 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 MYD88Q99836 296 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
PRKCH-208ENST00000553846 PPP2R3BQ9Y5P8 575 aa11.8□□□□□ -0.52
PRKCH-208ENST00000553846 VCANP13611 3396 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 IGKV5-2P06315 115 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 SP3Q02447 781 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 UBE2Q1Q7Z7E8 422 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 SHISA4Q96DD7 197 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
PRKCH-208ENST00000553846 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
PRKCH-208ENST00000553846 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
PRKCH-208ENST00000553846 PTCH2Q9Y6C5 1203 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms