RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 PKN2Q16513 984 aaKnown RBP22.8■■□□□ 1.24
SYNE2-211ENST00000553801 KSR2Q6VAB6 950 aa22.8■■□□□ 1.24
SYNE2-211ENST00000553801 TTLL11Q8NHH1 800 aa22.8■■□□□ 1.24
SYNE2-211ENST00000553801 HDAC9Q9UKV0 1011 aa22.8■■□□□ 1.24
SYNE2-211ENST00000553801 UBE2Q2LH0YL09 131 aa22.79■■□□□ 1.24
SYNE2-211ENST00000553801 PCDH10Q9P2E7 1040 aa22.79■■□□□ 1.24
SYNE2-211ENST00000553801 CCT4P50991 539 aaKnown RBP22.78■■□□□ 1.24
SYNE2-211ENST00000553801 NBPF9Q3BBW0 867 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 DACT2Q5SW24 774 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 STRIP1Q5VSL9 837 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 MOB2Q70IA6 237 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 FBXW7Q969H0 707 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 COA1Q9GZY4 146 aa22.78■■□□□ 1.24
SYNE2-211ENST00000553801 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
SYNE2-211ENST00000553801 PI4KAP1Q8N8J0 262 aa22.77■■□□□ 1.24
SYNE2-211ENST00000553801 GREM2Q9H772 168 aa22.77■■□□□ 1.24
SYNE2-211ENST00000553801 SCAF8Q9UPN6 1271 aaKnown RBP22.77■■□□□ 1.24
SYNE2-211ENST00000553801 LEMD3Q9Y2U8 911 aa22.77■■□□□ 1.24
SYNE2-211ENST00000553801 WNT10BO00744 389 aa22.76■■□□□ 1.23
SYNE2-211ENST00000553801 IGKV5-2P06315 115 aa22.76■■□□□ 1.23
SYNE2-211ENST00000553801 IGHMBP2P38935 993 aaKnown RBP22.76■■□□□ 1.23
SYNE2-211ENST00000553801 PRAMEF18Q5VWM3 479 aa22.76■■□□□ 1.23
SYNE2-211ENST00000553801 STK31Q9BXU1 1019 aa22.76■■□□□ 1.23
SYNE2-211ENST00000553801 PRKRIP1Q9H875 184 aaPredicted RBP22.76■■□□□ 1.23
SYNE2-211ENST00000553801 MYH3P11055 1940 aa22.76■■□□□ 1.23
SYNE2-211ENST00000553801 WTIPA6NIX2 430 aaPredicted RBP22.75■■□□□ 1.23
SYNE2-211ENST00000553801 TBC1D8O95759 1140 aa22.75■■□□□ 1.23
SYNE2-211ENST00000553801 TM4SF4P48230 202 aa22.75■■□□□ 1.23
SYNE2-211ENST00000553801 ZNF296Q8WUU4 475 aaPredicted RBP22.75■■□□□ 1.23
SYNE2-211ENST00000553801 HPS5Q9UPZ3 1129 aa22.75■■□□□ 1.23
SYNE2-211ENST00000553801 SREBF2Q12772 1141 aa22.74■■□□□ 1.23
SYNE2-211ENST00000553801 NOM1Q5C9Z4 860 aaKnown RBP22.74■■□□□ 1.23
SYNE2-211ENST00000553801 ARMC9Q7Z3E5 817 aa22.74■■□□□ 1.23
SYNE2-211ENST00000553801 MXD3Q9BW11 206 aa22.74■■□□□ 1.23
SYNE2-211ENST00000553801 TTLL5Q6EMB2 1281 aa22.73■■□□□ 1.23
SYNE2-211ENST00000553801 APOBEC3FQ8IUX4 373 aaKnown RBP22.73■■□□□ 1.23
SYNE2-211ENST00000553801 TSPYL6Q8N831 410 aa22.73■■□□□ 1.23
SYNE2-211ENST00000553801 ANKRD2Q9GZV1 360 aa22.73■■□□□ 1.23
SYNE2-211ENST00000553801 NEURL1BA8MQ27 555 aa22.72■■□□□ 1.23
SYNE2-211ENST00000553801 H7C1W4 665 aa22.72■■□□□ 1.23
SYNE2-211ENST00000553801 CWF19L2Q2TBE0 894 aaKnown RBP22.72■■□□□ 1.23
SYNE2-211ENST00000553801 GPR25O00155 361 aa22.71■■□□□ 1.23
SYNE2-211ENST00000553801 TNRC18O15417 2968 aaPredicted RBP22.71■■□□□ 1.23
SYNE2-211ENST00000553801 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
SYNE2-211ENST00000553801 MPHOSPH8Q99549 860 aa22.71■■□□□ 1.23
SYNE2-211ENST00000553801 ZNF804BA4D1E1 1349 aa22.71■■□□□ 1.23
SYNE2-211ENST00000553801 SPEF2Q9C093 1822 aa22.71■■□□□ 1.23
SYNE2-211ENST00000553801 SASH1O94885 1247 aa22.7■■□□□ 1.22
SYNE2-211ENST00000553801 TXNRD3Q86VQ6 643 aa22.7■■□□□ 1.22
SYNE2-211ENST00000553801 PLA2G12BQ9BX93 195 aa22.7■■□□□ 1.22
SYNE2-211ENST00000553801 ITGA6P23229 1130 aa22.69■■□□□ 1.22
SYNE2-211ENST00000553801 PTPN12Q05209 780 aaKnown RBP22.69■■□□□ 1.22
SYNE2-211ENST00000553801 MKRN3Q13064 507 aaKnown RBP22.69■■□□□ 1.22
SYNE2-211ENST00000553801 PRPF38BQ5VTL8 546 aaKnown RBP22.69■■□□□ 1.22
SYNE2-211ENST00000553801 KIAA0825Q8IV33 1275 aa22.69■■□□□ 1.22
SYNE2-211ENST00000553801 FKTNO75072 461 aa22.68■■□□□ 1.22
SYNE2-211ENST00000553801 KCNJ4P48050 445 aa22.68■■□□□ 1.22
SYNE2-211ENST00000553801 FBXO46Q6PJ61 603 aaPredicted RBP22.68■■□□□ 1.22
SYNE2-211ENST00000553801 CFHR5Q9BXR6 569 aa22.68■■□□□ 1.22
SYNE2-211ENST00000553801 ALDH1A1P00352 501 aa22.67■■□□□ 1.22
SYNE2-211ENST00000553801 SLC4A2P04920 1241 aa22.67■■□□□ 1.22
SYNE2-211ENST00000553801 GTF2IP78347 998 aa22.67■■□□□ 1.22
SYNE2-211ENST00000553801 PRKG1Q13976 671 aa22.67■■□□□ 1.22
SYNE2-211ENST00000553801 MYH16Q9H6N6 1097 aa22.67■■□□□ 1.22
SYNE2-211ENST00000553801 ZNF646O15015 1829 aaPredicted RBP22.66■■□□□ 1.22
SYNE2-211ENST00000553801 GCKRQ14397 625 aa22.66■■□□□ 1.22
SYNE2-211ENST00000553801 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
SYNE2-211ENST00000553801 LDLRAD1Q5T700 205 aa22.66■■□□□ 1.22
SYNE2-211ENST00000553801 TSR2Q969E8 191 aaKnown RBP22.66■■□□□ 1.22
SYNE2-211ENST00000553801 ZBED3Q96IU2 234 aaPredicted RBP22.66■■□□□ 1.22
SYNE2-211ENST00000553801 ANGEL1Q9UNK9 670 aaKnown RBP22.66■■□□□ 1.22
SYNE2-211ENST00000553801 CSF1RP07333 972 aa22.65■■□□□ 1.22
SYNE2-211ENST00000553801 INHBEP58166 350 aa22.65■■□□□ 1.22
SYNE2-211ENST00000553801 DLGAP5Q15398 846 aa22.65■■□□□ 1.22
SYNE2-211ENST00000553801 SPRYD7Q5W111 196 aa22.65■■□□□ 1.22
SYNE2-211ENST00000553801 G2E3Q7L622 706 aa22.65■■□□□ 1.22
SYNE2-211ENST00000553801 COL1A1P02452 1464 aaPredicted RBP22.65■■□□□ 1.22
SYNE2-211ENST00000553801 KLRK1P26718 216 aa22.64■■□□□ 1.21
SYNE2-211ENST00000553801 CHRNDQ07001 517 aa22.64■■□□□ 1.21
SYNE2-211ENST00000553801 SLC10A4Q96EP9 437 aa22.64■■□□□ 1.21
SYNE2-211ENST00000553801 CD209Q9NNX6 404 aa22.64■■□□□ 1.21
SYNE2-211ENST00000553801 ANKRD18BA2A2Z9 1011 aa22.63■■□□□ 1.21
SYNE2-211ENST00000553801 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
SYNE2-211ENST00000553801 CCDC27Q2M243 656 aa22.63■■□□□ 1.21
SYNE2-211ENST00000553801 DEFB129Q9H1M3 183 aa22.63■■□□□ 1.21
SYNE2-211ENST00000553801 PPP2R3BQ9Y5P8 575 aa22.63■■□□□ 1.21
SYNE2-211ENST00000553801 PPP1R12BO60237 982 aaPredicted RBP22.62■■□□□ 1.21
SYNE2-211ENST00000553801 FLIIQ13045 1269 aa22.62■■□□□ 1.21
SYNE2-211ENST00000553801 MTMR14Q8NCE2 650 aa22.62■■□□□ 1.21
SYNE2-211ENST00000553801 LINS1Q8NG48 757 aa22.62■■□□□ 1.21
SYNE2-211ENST00000553801 DNAAF4Q8WXU2 420 aa22.62■■□□□ 1.21
SYNE2-211ENST00000553801 UNCXA6NJT0 531 aa22.61■■□□□ 1.21
SYNE2-211ENST00000553801 MYO1BO43795 1136 aa22.61■■□□□ 1.21
SYNE2-211ENST00000553801 CASP7P55210 303 aa22.61■■□□□ 1.21
SYNE2-211ENST00000553801 FKBP5Q13451 457 aaPredicted RBP22.61■■□□□ 1.21
SYNE2-211ENST00000553801 MAP3K11Q16584 847 aa22.61■■□□□ 1.21
SYNE2-211ENST00000553801 C15orf52Q6ZUT6 534 aaKnown RBP22.61■■□□□ 1.21
SYNE2-211ENST00000553801 ZBTB48P10074 688 aaPredicted RBP22.6■■□□□ 1.21
SYNE2-211ENST00000553801 SUPT20HL1Q3ZLR7 823 aa22.6■■□□□ 1.21
SYNE2-211ENST00000553801 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms