RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 COPRSQ9NQ92 184 aa14.8□□□□□ -0.04
TMEM253-202ENST00000553744 DDX19BQ9UMR2 479 aa14.8□□□□□ -0.04
TMEM253-202ENST00000553744 PA2G4Q9UQ80 394 aaKnown RBP14.8□□□□□ -0.04
TMEM253-202ENST00000553744 COG6Q9Y2V7 657 aa14.8□□□□□ -0.04
TMEM253-202ENST00000553744 SCN4AP35499 1836 aa14.8□□□□□ -0.04
TMEM253-202ENST00000553744 PNMA6EA0A0J9YXQ4 647 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 PSMD14O00487 310 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 CIAO1O76071 339 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 PCNTO95613 3336 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 SCNN1DP51172 638 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 UBE4AQ14139 1066 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 C20orf194Q5TEA3 1177 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 ATG9AQ7Z3C6 839 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
TMEM253-202ENST00000553744 JMYQ8N9B5 988 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 SIL1Q9H173 461 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 KCNQ5Q9NR82 932 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 HACL1Q9UJ83 578 aa14.79□□□□□ -0.04
TMEM253-202ENST00000553744 SCN9AQ15858 1988 aa14.78□□□□□ -0.04
TMEM253-202ENST00000553744 PDE8BO95263 885 aa14.78□□□□□ -0.04
TMEM253-202ENST00000553744 LMOD1P29536 600 aaPredicted RBP14.78□□□□□ -0.04
TMEM253-202ENST00000553744 TAF1DQ9H5J8 278 aaPredicted RBP14.78□□□□□ -0.04
TMEM253-202ENST00000553744 PSME4Q14997 1843 aa14.78□□□□□ -0.04
TMEM253-202ENST00000553744 ZNF609O15014 1411 aa14.77□□□□□ -0.04
TMEM253-202ENST00000553744 EPHX2P34913 555 aa14.77□□□□□ -0.05
TMEM253-202ENST00000553744 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.05
TMEM253-202ENST00000553744 GMPSP49915 693 aaPredicted RBP14.77□□□□□ -0.05
TMEM253-202ENST00000553744 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.05
TMEM253-202ENST00000553744 ZNF804AQ7Z570 1209 aa14.77□□□□□ -0.05
TMEM253-202ENST00000553744 VIL1P09327 827 aaKnown RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 RPS12P25398 132 aaKnown RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 ATP8B2P98198 1209 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 POLA2Q14181 598 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 PUM3Q15397 648 aaKnown RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 RBM46Q8TBY0 533 aaKnown RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 SSH3Q8TE77 659 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 CD209Q9NNX6 404 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 ZBTB40Q9NUA8 1239 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 GPRC5DQ9NZD1 345 aa14.76□□□□□ -0.05
TMEM253-202ENST00000553744 ZBTB12Q9Y330 459 aaPredicted RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 ZNF646O15015 1829 aaPredicted RBP14.76□□□□□ -0.05
TMEM253-202ENST00000553744 USP17L3A6NCW0 530 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 USP17L4A6NCW7 530 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 FGFR2P21802 821 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 EPS15P42566 896 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 USP17L1Q7RTZ2 530 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 DPF2Q92785 391 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 KLRG1Q96E93 195 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 CEP126Q9P2H0 1117 aa14.75□□□□□ -0.05
TMEM253-202ENST00000553744 IL1R1P14778 569 aa14.74□□□□□ -0.05
TMEM253-202ENST00000553744 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
TMEM253-202ENST00000553744 RSBN1LQ6PCB5 846 aaPredicted RBP14.74□□□□□ -0.05
TMEM253-202ENST00000553744 LPIN2Q92539 896 aa14.74□□□□□ -0.05
TMEM253-202ENST00000553744 FAM84BQ96KN1 310 aaPredicted RBP14.74□□□□□ -0.05
TMEM253-202ENST00000553744 ADAMTSL1Q8N6G6 1762 aa14.74□□□□□ -0.05
TMEM253-202ENST00000553744 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
TMEM253-202ENST00000553744 POTEIP0CG38 1075 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 SLC5A1P13866 664 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 HIBADHP31937 336 aaKnown RBP14.73□□□□□ -0.05
TMEM253-202ENST00000553744 GYG1P46976 350 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 EAPPQ56P03 285 aaPredicted RBP14.73□□□□□ -0.05
TMEM253-202ENST00000553744 DACT2Q5SW24 774 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 PNMA8AQ86V59 439 aaPredicted RBP14.73□□□□□ -0.05
TMEM253-202ENST00000553744 LDHDQ86WU2 507 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 MICALL2Q8IY33 904 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 SMC1BQ8NDV3 1235 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 AGBL3Q8NEM8 1001 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 FBXW7Q969H0 707 aa14.73□□□□□ -0.05
TMEM253-202ENST00000553744 ADARB2Q9NS39 739 aaKnown RBP14.73□□□□□ -0.05
TMEM253-202ENST00000553744 MYO3BQ8WXR4 1341 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 GTF2IP78347 998 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 FSTL1Q12841 308 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 CAVIN4Q5BKX8 364 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 TTLL5Q6EMB2 1281 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 USP50Q70EL3 339 aaPredicted RBP14.72□□□□□ -0.05
TMEM253-202ENST00000553744 FBXO33Q7Z6M2 555 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 GMLQ99445 158 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 CNOT7Q9UIV1 285 aaKnown RBP14.72□□□□□ -0.05
TMEM253-202ENST00000553744 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
TMEM253-202ENST00000553744 H7C1D1 291 aa14.71□□□□□ -0.05
TMEM253-202ENST00000553744 HTRA3P83110 453 aa14.71□□□□□ -0.05
TMEM253-202ENST00000553744 TFCP2Q12800 502 aa14.71□□□□□ -0.05
TMEM253-202ENST00000553744 G3BP1Q13283 466 aaKnown RBP eCLIP14.71□□□□□ -0.05
TMEM253-202ENST00000553744 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
TMEM253-202ENST00000553744 RPAP2Q8IXW5 612 aaPredicted RBP14.71□□□□□ -0.05
TMEM253-202ENST00000553744 TDRD7Q8NHU6 1098 aaKnown RBP14.71□□□□□ -0.05
TMEM253-202ENST00000553744 MXD3Q9BW11 206 aa14.71□□□□□ -0.05
TMEM253-202ENST00000553744 SASH1O94885 1247 aa14.7□□□□□ -0.06
TMEM253-202ENST00000553744 BCAMP50895 628 aa14.7□□□□□ -0.06
TMEM253-202ENST00000553744 CHADLQ6NUI6 762 aa14.7□□□□□ -0.06
TMEM253-202ENST00000553744 TRPM4Q8TD43 1214 aa14.7□□□□□ -0.06
TMEM253-202ENST00000553744 AKAP2Q9Y2D5 859 aa14.7□□□□□ -0.06
TMEM253-202ENST00000553744 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
TMEM253-202ENST00000553744 FAM205AQ6ZU69 1335 aa14.69□□□□□ -0.06
TMEM253-202ENST00000553744 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms