RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ZBTB42B2RXF5 422 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 ZBTB39O15060 712 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 MAP3K6O95382 1288 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 ALBP02768 609 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 NFKB1P19838 968 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 TARSP26639 723 aaKnown RBP7.13□□□□□ -1.27
ATXN3-220ENST00000553491 PLA2G4EQ3MJ16 856 aa7.13□□□□□ -1.27
ATXN3-220ENST00000553491 GPATCH8Q9UKJ3 1502 aaKnown RBP7.12□□□□□ -1.27
ATXN3-220ENST00000553491 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 M0R082 166 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 ARID4AP29374 1257 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-220ENST00000553491 ILDR2Q71H61 639 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 RGL4Q8IZJ4 473 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 ZNF417Q8TAU3 575 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 ZNF587Q96SQ5 575 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-220ENST00000553491 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
ATXN3-220ENST00000553491 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 SLC6A14Q9UN76 642 aa7.12□□□□□ -1.27
ATXN3-220ENST00000553491 NCOA2Q15596 1464 aa7.11□□□□□ -1.27
ATXN3-220ENST00000553491 SASH3O75995 380 aa7.11□□□□□ -1.27
ATXN3-220ENST00000553491 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
ATXN3-220ENST00000553491 TRIP4Q15650 581 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-220ENST00000553491 KRT25Q7Z3Z0 450 aa7.11□□□□□ -1.27
ATXN3-220ENST00000553491 ALYREFQ86V81 257 aaKnown RBP7.11□□□□□ -1.27
ATXN3-220ENST00000553491 CCER1Q8TC90 406 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-220ENST00000553491 UBE2OQ9C0C9 1292 aaKnown RBP7.11□□□□□ -1.27
ATXN3-220ENST00000553491 STIM2Q9P246 746 aa7.11□□□□□ -1.27
ATXN3-220ENST00000553491 SAMD9LQ8IVG5 1584 aa7.11□□□□□ -1.27
ATXN3-220ENST00000553491 SPAG9O60271 1321 aaKnown RBP7.1□□□□□ -1.27
ATXN3-220ENST00000553491 TSPY4P0CV99 314 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 TSPY10P0CW01 314 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 NID1P14543 1247 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 ITGAEP38570 1179 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 TMCO4Q5TGY1 634 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 CMTR1Q8N1G2 835 aaKnown RBP7.1□□□□□ -1.27
ATXN3-220ENST00000553491 TRPM4Q8TD43 1214 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 PNMA5Q96PV4 448 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 PLVAPQ9BX97 442 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
ATXN3-220ENST00000553491 FRMPD1Q5SYB0 1578 aa7.1□□□□□ -1.27
ATXN3-220ENST00000553491 PIK3R2O00459 728 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 XYLBO75191 536 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 SERPINB4P48594 390 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 DHX32Q7L7V1 743 aaKnown RBP7.09□□□□□ -1.27
ATXN3-220ENST00000553491 IGFLR1Q9H665 355 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 ZFYVE16Q7Z3T8 1539 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 SYCP2Q9BX26 1530 aa7.09□□□□□ -1.27
ATXN3-220ENST00000553491 TRAPPC8Q9Y2L5 1435 aa7.09□□□□□ -1.28
ATXN3-220ENST00000553491 FER1L4A9Z1Z3 1794 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 KIDINS220Q9ULH0 1771 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 ARHGEF12Q9NZN5 1544 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 PROCP04070 461 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 RARAP10276 462 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 ZAP70P43403 619 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
ATXN3-220ENST00000553491 ZNF518AQ6AHZ1 1483 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 RIMS1Q86UR5 1692 aaKnown RBP7.08□□□□□ -1.28
ATXN3-220ENST00000553491 YEATS2Q9ULM3 1422 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 HECW2Q9P2P5 1572 aa7.08□□□□□ -1.28
ATXN3-220ENST00000553491 ABCC1P33527 1531 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 ATP10AO60312 1499 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 PLEKHH2Q8IVE3 1493 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 IGHA1P01876 353 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 GPLD1P80108 840 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 TBC1D8BQ0IIM8 1120 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 GRIK5Q16478 980 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
ATXN3-220ENST00000553491 HELQQ8TDG4 1101 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 TLR7Q9NYK1 1049 aaKnown RBP7.07□□□□□ -1.28
ATXN3-220ENST00000553491 POGZQ7Z3K3 1410 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 BCORL1Q5H9F3 1711 aa7.07□□□□□ -1.28
ATXN3-220ENST00000553491 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 CAMSAP2Q08AD1 1489 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 PTPN23Q9H3S7 1636 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 MMP20O60882 483 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 HOXD8P13378 290 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-220ENST00000553491 NPR3P17342 541 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
ATXN3-220ENST00000553491 MFAP1P55081 439 aaKnown RBP7.06□□□□□ -1.28
ATXN3-220ENST00000553491 PLAURQ03405 335 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 GGT6Q6P531 493 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 GTF3C2Q8WUA4 911 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-220ENST00000553491 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 LPIN3Q9BQK8 851 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 SIGLEC1Q9BZZ2 1709 aa7.06□□□□□ -1.28
ATXN3-220ENST00000553491 ABCA6Q8N139 1617 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 SOWAHDA6NJG2 315 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 LILRB5O75023 590 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 NRLP54845 237 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 PCSK7Q16549 785 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 CD163Q86VB7 1156 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 ATCAYQ86WG3 371 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 ABTB2Q8N961 1025 aa7.05□□□□□ -1.28
ATXN3-220ENST00000553491 GPR152Q8TDT2 470 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms