RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 TNIP1Q15025 636 aa11.81□□□□□ -0.52
PFDN5-215ENST00000551223 C15orf52Q6ZUT6 534 aaKnown RBP11.81□□□□□ -0.52
PFDN5-215ENST00000551223 COA1Q9GZY4 146 aa11.81□□□□□ -0.52
PFDN5-215ENST00000551223 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
PFDN5-215ENST00000551223 WDR90Q96KV7 1748 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 SCN9AQ15858 1988 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
PFDN5-215ENST00000551223 POLA2Q14181 598 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 PODNQ7Z5L7 613 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 SSH3Q8TE77 659 aa11.8□□□□□ -0.52
PFDN5-215ENST00000551223 PSMD14O00487 310 aa11.79□□□□□ -0.52
PFDN5-215ENST00000551223 CHMP4BQ9H444 224 aaKnown RBP11.79□□□□□ -0.52
PFDN5-215ENST00000551223 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
PFDN5-215ENST00000551223 CEP126Q9P2H0 1117 aa11.79□□□□□ -0.52
PFDN5-215ENST00000551223 IQCA1LA6NCM1 817 aa11.78□□□□□ -0.52
PFDN5-215ENST00000551223 VIL1P09327 827 aaKnown RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 FGFR2P21802 821 aa11.78□□□□□ -0.52
PFDN5-215ENST00000551223 GYG1P46976 350 aa11.78□□□□□ -0.52
PFDN5-215ENST00000551223 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 SCNN1DP51172 638 aa11.78□□□□□ -0.52
PFDN5-215ENST00000551223 PUM3Q15397 648 aaKnown RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 FAM84BQ96KN1 310 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 HACL1Q9UJ83 578 aa11.78□□□□□ -0.52
PFDN5-215ENST00000551223 ZBTB12Q9Y330 459 aaPredicted RBP11.78□□□□□ -0.52
PFDN5-215ENST00000551223 SCN4AP35499 1836 aa11.77□□□□□ -0.52
PFDN5-215ENST00000551223 USP17L3A6NCW0 530 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 USP17L4A6NCW7 530 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-215ENST00000551223 HIBADHP31937 336 aaKnown RBP11.77□□□□□ -0.53
PFDN5-215ENST00000551223 EPHX2P34913 555 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 EPS15P42566 896 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 TFCP2Q12800 502 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.53
PFDN5-215ENST00000551223 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 ZNF804AQ7Z570 1209 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 RPAP2Q8IXW5 612 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-215ENST00000551223 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-215ENST00000551223 LPIN2Q92539 896 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 GPRC5DQ9NZD1 345 aa11.77□□□□□ -0.53
PFDN5-215ENST00000551223 SURF6O75683 361 aaKnown RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 TOMM70O94826 608 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 IL1R1P14778 569 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 ATP2B3Q16720 1220 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 DACT2Q5SW24 774 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 STRIP1Q5VSL9 837 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 RSBN1LQ6PCB5 846 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 FBXO33Q7Z6M2 555 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 SIRT2Q8IXJ6 389 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 DPF2Q92785 391 aa11.76□□□□□ -0.53
PFDN5-215ENST00000551223 CNOT7Q9UIV1 285 aaKnown RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.76□□□□□ -0.53
PFDN5-215ENST00000551223 PSME4Q14997 1843 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 SHTN1A0MZ66 631 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 SASH1O94885 1247 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 SLC5A1P13866 664 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 RPS12P25398 132 aaKnown RBP11.75□□□□□ -0.53
PFDN5-215ENST00000551223 BCAMP50895 628 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 GTF2IP78347 998 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 CAVIN4Q5BKX8 364 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 TDRD7Q8NHU6 1098 aaKnown RBP11.75□□□□□ -0.53
PFDN5-215ENST00000551223 FBXW7Q969H0 707 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 GMLQ99445 158 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 MXD3Q9BW11 206 aa11.75□□□□□ -0.53
PFDN5-215ENST00000551223 SUPT16HQ9Y5B9 1047 aaKnown RBP11.75□□□□□ -0.53
PFDN5-215ENST00000551223 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 TIMM10P62072 90 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 OS9Q13438 667 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-215ENST00000551223 EAPPQ56P03 285 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-215ENST00000551223 PNMA8AQ86V59 439 aaPredicted RBP11.74□□□□□ -0.53
PFDN5-215ENST00000551223 VPS37DQ86XT2 251 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 MICALL2Q8IY33 904 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
PFDN5-215ENST00000551223 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
PFDN5-215ENST00000551223 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
PFDN5-215ENST00000551223 A0A1B0GUL7 405 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 H7C1D1 291 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 ZNF609O15014 1411 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 HMMRO75330 724 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 ADORA1P30542 326 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 C1QTNF8P60827 252 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 FAM205AQ6ZU69 1335 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 IQSEC3Q9UPP2 1182 aaPredicted RBP11.73□□□□□ -0.53
PFDN5-215ENST00000551223 JAG2Q9Y219 1238 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
PFDN5-215ENST00000551223 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
PFDN5-215ENST00000551223 USP17L8P0C7I0 530 aa11.72□□□□□ -0.53
PFDN5-215ENST00000551223 HIRAP54198 1017 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-215ENST00000551223 ZNF280AP59817 542 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-215ENST00000551223 USP50Q70EL3 339 aaPredicted RBP11.72□□□□□ -0.53
PFDN5-215ENST00000551223 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
PFDN5-215ENST00000551223 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
PFDN5-215ENST00000551223 CERS5Q8N5B7 392 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms