RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 GPATCH3Q96I76 525 aa17.29■□□□□ 0.36
CACNB3-216ENST00000550391 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
CACNB3-216ENST00000550391 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
CACNB3-216ENST00000550391 AOX1Q06278 1338 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-216ENST00000550391 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 SP8Q8IXZ3 490 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 LPIN2Q92539 896 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 DBNDD2Q9BQY9 259 aa17.28■□□□□ 0.36
CACNB3-216ENST00000550391 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 FOXN1O15353 648 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 KCNA3P22001 575 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 RGS19P49795 217 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 ATP6V0A2Q9Y487 856 aa17.27■□□□□ 0.36
CACNB3-216ENST00000550391 LTBP1Q14766 1721 aa17.27■□□□□ 0.35
CACNB3-216ENST00000550391 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 VEGFAP15692 232 aaPredicted RBP17.26■□□□□ 0.35
CACNB3-216ENST00000550391 DPEP1P16444 411 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 UBE4AQ14139 1066 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 ABHD8Q96I13 439 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
CACNB3-216ENST00000550391 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
CACNB3-216ENST00000550391 ZC3H4Q9UPT8 1303 aaKnown RBP17.25■□□□□ 0.35
CACNB3-216ENST00000550391 SNAP23O00161 211 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 ERC2O15083 957 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 SLC5A1P13866 664 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 ADORA1P30542 326 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 GPSM2P81274 684 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
CACNB3-216ENST00000550391 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
CACNB3-216ENST00000550391 XDHP47989 1333 aa17.24■□□□□ 0.35
CACNB3-216ENST00000550391 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
CACNB3-216ENST00000550391 LEMD3Q9Y2U8 911 aa17.24■□□□□ 0.35
CACNB3-216ENST00000550391 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-216ENST00000550391 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
CACNB3-216ENST00000550391 GSPT1P15170 499 aaKnown RBP17.23■□□□□ 0.35
CACNB3-216ENST00000550391 ATP5JP18859 108 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 KCNJ4P48050 445 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 GORABQ5T7V8 394 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-216ENST00000550391 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
CACNB3-216ENST00000550391 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
CACNB3-216ENST00000550391 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
CACNB3-216ENST00000550391 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
CACNB3-216ENST00000550391 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
CACNB3-216ENST00000550391 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.35
CACNB3-216ENST00000550391 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
CACNB3-216ENST00000550391 OLFM4Q6UX06 510 aa17.21■□□□□ 0.35
CACNB3-216ENST00000550391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNB3-216ENST00000550391 ZNF512BQ96KM6 892 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-216ENST00000550391 PIM2Q9P1W9 311 aa17.21■□□□□ 0.35
CACNB3-216ENST00000550391 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
CACNB3-216ENST00000550391 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 C15orf52Q6ZUT6 534 aaKnown RBP17.2■□□□□ 0.34
CACNB3-216ENST00000550391 MPNDQ8N594 471 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 TBC1D16Q8TBP0 767 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 GGA1Q9UJY5 639 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 SNED1Q8TER0 1413 aa17.2■□□□□ 0.34
CACNB3-216ENST00000550391 KLRK1P26718 216 aa17.19■□□□□ 0.34
CACNB3-216ENST00000550391 PHKA1P46020 1223 aa17.19■□□□□ 0.34
CACNB3-216ENST00000550391 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
CACNB3-216ENST00000550391 BOLA2Q9H3K6 86 aa17.19■□□□□ 0.34
CACNB3-216ENST00000550391 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
CACNB3-216ENST00000550391 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
CACNB3-216ENST00000550391 UFL1O94874 794 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 SDSP20132 328 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-216ENST00000550391 BCAMP50895 628 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 CAVIN4Q5BKX8 364 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-216ENST00000550391 HAUS7Q99871 368 aa17.18■□□□□ 0.34
CACNB3-216ENST00000550391 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 C21orf2O43822 256 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 GYG1P46976 350 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 DALRD3Q5D0E6 543 aaKnown RBP17.17■□□□□ 0.34
CACNB3-216ENST00000550391 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-216ENST00000550391 FBXO33Q7Z6M2 555 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
CACNB3-216ENST00000550391 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-216ENST00000550391 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
CACNB3-216ENST00000550391 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
CACNB3-216ENST00000550391 ZBTB22O15209 634 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms