RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 VGLL2Q8N8G2 317 aa24.07■■□□□ 1.44
DDX54-207ENST00000550016 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
DDX54-207ENST00000550016 KLRK1P26718 216 aa24.06■■□□□ 1.44
DDX54-207ENST00000550016 IL15P40933 162 aaPredicted RBP24.06■■□□□ 1.44
DDX54-207ENST00000550016 POLA2Q14181 598 aa24.06■■□□□ 1.44
DDX54-207ENST00000550016 SSH3Q8TE77 659 aa24.06■■□□□ 1.44
DDX54-207ENST00000550016 L3MBTL3Q96JM7 780 aaPredicted RBP24.06■■□□□ 1.44
DDX54-207ENST00000550016 COA1Q9GZY4 146 aa24.06■■□□□ 1.44
DDX54-207ENST00000550016 IRS2Q9Y4H2 1338 aa24.06■■□□□ 1.44
DDX54-207ENST00000550016 PODNQ7Z5L7 613 aa24.05■■□□□ 1.44
DDX54-207ENST00000550016 CEP126Q9P2H0 1117 aa24.05■■□□□ 1.44
DDX54-207ENST00000550016 POTECB2RU33 542 aa24.04■■□□□ 1.44
DDX54-207ENST00000550016 CEP85Q6P2H3 762 aa24.04■■□□□ 1.44
DDX54-207ENST00000550016 KCNQ5Q9NR82 932 aa24.04■■□□□ 1.44
DDX54-207ENST00000550016 KIF3CO14782 793 aa24.03■■□□□ 1.44
DDX54-207ENST00000550016 PSMD14O00487 310 aa24.02■■□□□ 1.44
DDX54-207ENST00000550016 PUM3Q15397 648 aaKnown RBP24.02■■□□□ 1.44
DDX54-207ENST00000550016 ZNF804AQ7Z570 1209 aa24.02■■□□□ 1.44
DDX54-207ENST00000550016 ZNF646O15015 1829 aaPredicted RBP24.01■■□□□ 1.43
DDX54-207ENST00000550016 IQCA1LA6NCM1 817 aa24.01■■□□□ 1.43
DDX54-207ENST00000550016 FGFR2P21802 821 aa24.01■■□□□ 1.43
DDX54-207ENST00000550016 G3BP1Q13283 466 aaKnown RBP eCLIP24.01■■□□□ 1.434e-7■■■■□ 24.7
DDX54-207ENST00000550016 RPAP2Q8IXW5 612 aaPredicted RBP24.01■■□□□ 1.43
DDX54-207ENST00000550016 VIL1P09327 827 aaKnown RBP24■■□□□ 1.43
DDX54-207ENST00000550016 CD209Q9NNX6 404 aa24■■□□□ 1.43
DDX54-207ENST00000550016 HACL1Q9UJ83 578 aa24■■□□□ 1.43
DDX54-207ENST00000550016 USP17L3A6NCW0 530 aa23.99■■□□□ 1.43
DDX54-207ENST00000550016 USP17L4A6NCW7 530 aa23.99■■□□□ 1.43
DDX54-207ENST00000550016 IFIT1P09914 478 aaKnown RBP23.99■■□□□ 1.43
DDX54-207ENST00000550016 GMPSP49915 693 aaPredicted RBP23.99■■□□□ 1.43
DDX54-207ENST00000550016 USP17L1Q7RTZ2 530 aa23.99■■□□□ 1.43
DDX54-207ENST00000550016 C16orf71Q8IYS4 520 aaPredicted RBP23.99■■□□□ 1.43
DDX54-207ENST00000550016 LPIN2Q92539 896 aa23.99■■□□□ 1.43
DDX54-207ENST00000550016 FAM84BQ96KN1 310 aaPredicted RBP23.99■■□□□ 1.43
DDX54-207ENST00000550016 MYH13Q9UKX3 1938 aa23.98■■□□□ 1.43
DDX54-207ENST00000550016 SURF6O75683 361 aaKnown RBP23.98■■□□□ 1.43
DDX54-207ENST00000550016 SLC5A1P13866 664 aa23.98■■□□□ 1.43
DDX54-207ENST00000550016 IL1R1P14778 569 aa23.98■■□□□ 1.43
DDX54-207ENST00000550016 LMOD1P29536 600 aaPredicted RBP23.98■■□□□ 1.43
DDX54-207ENST00000550016 HIBADHP31937 336 aaKnown RBP23.98■■□□□ 1.43
DDX54-207ENST00000550016 GYG1P46976 350 aa23.98■■□□□ 1.43
DDX54-207ENST00000550016 SCNN1DP51172 638 aa23.98■■□□□ 1.43
DDX54-207ENST00000550016 NOP58Q9Y2X3 529 aaKnown RBP23.98■■□□□ 1.43
DDX54-207ENST00000550016 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
DDX54-207ENST00000550016 TFCP2Q12800 502 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 ATP2B3Q16720 1220 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 CAVIN4Q5BKX8 364 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 FBXO33Q7Z6M2 555 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 ARAP2Q8WZ64 1704 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 TAF1DQ9H5J8 278 aaPredicted RBP23.97■■□□□ 1.43
DDX54-207ENST00000550016 GPRC5DQ9NZD1 345 aa23.97■■□□□ 1.43
DDX54-207ENST00000550016 HMMRO75330 724 aa23.96■■□□□ 1.43
DDX54-207ENST00000550016 RPS12P25398 132 aaKnown RBP23.96■■□□□ 1.43
DDX54-207ENST00000550016 STRIP1Q5VSL9 837 aa23.96■■□□□ 1.43
DDX54-207ENST00000550016 DPF2Q92785 391 aa23.96■■□□□ 1.43
DDX54-207ENST00000550016 AKAP2Q9Y2D5 859 aa23.96■■□□□ 1.43
DDX54-207ENST00000550016 ZBTB12Q9Y330 459 aaPredicted RBP23.96■■□□□ 1.43
DDX54-207ENST00000550016 EPHX2P34913 555 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 EPS15P42566 896 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 OS9Q13438 667 aaPredicted RBP23.95■■□□□ 1.42
DDX54-207ENST00000550016 TTLL5Q6EMB2 1281 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 RSBN1LQ6PCB5 846 aaPredicted RBP23.95■■□□□ 1.42
DDX54-207ENST00000550016 VPS37DQ86XT2 251 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 SIRT2Q8IXJ6 389 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 CRBNQ96SW2 442 aa23.95■■□□□ 1.42
DDX54-207ENST00000550016 TOMM70O94826 608 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 SASH1O94885 1247 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 GTF2IP78347 998 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 DACT2Q5SW24 774 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 AGBL3Q8NEM8 1001 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 TDRD7Q8NHU6 1098 aaKnown RBP23.94■■□□□ 1.42
DDX54-207ENST00000550016 FBXW7Q969H0 707 aa23.94■■□□□ 1.42
DDX54-207ENST00000550016 CNOT7Q9UIV1 285 aaKnown RBP23.94■■□□□ 1.42
DDX54-207ENST00000550016 ZNF609O15014 1411 aa23.93■■□□□ 1.42
DDX54-207ENST00000550016 BCAMP50895 628 aa23.93■■□□□ 1.42
DDX54-207ENST00000550016 TIMM10P62072 90 aa23.92■■□□□ 1.42
DDX54-207ENST00000550016 PNMA8AQ86V59 439 aaPredicted RBP23.92■■□□□ 1.42
DDX54-207ENST00000550016 GMLQ99445 158 aa23.92■■□□□ 1.42
DDX54-207ENST00000550016 H7C1D1 291 aa23.91■■□□□ 1.42
DDX54-207ENST00000550016 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
DDX54-207ENST00000550016 RBM46Q8TBY0 533 aaKnown RBP23.91■■□□□ 1.42
DDX54-207ENST00000550016 ADARB2Q9NS39 739 aaKnown RBP23.91■■□□□ 1.42
DDX54-207ENST00000550016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.91■■□□□ 1.42
DDX54-207ENST00000550016 FAM205AQ6ZU69 1335 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 MYO3BQ8WXR4 1341 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 A0A1B0GUL7 405 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 ERC1Q8IUD2 1116 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 MICALL2Q8IY33 904 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 MXD3Q9BW11 206 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 GPR108Q9NPR9 543 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 EXOC6BQ9Y2D4 811 aa23.9■■□□□ 1.42
DDX54-207ENST00000550016 FRAT2O75474 233 aaPredicted RBP23.89■■□□□ 1.41
DDX54-207ENST00000550016 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
DDX54-207ENST00000550016 USP50Q70EL3 339 aaPredicted RBP23.89■■□□□ 1.41
DDX54-207ENST00000550016 POLR2AP24928 1970 aaKnown RBP23.89■■□□□ 1.41
DDX54-207ENST00000550016 ADAMTSL1Q8N6G6 1762 aa23.88■■□□□ 1.41
DDX54-207ENST00000550016 SHTN1A0MZ66 631 aa23.88■■□□□ 1.41
DDX54-207ENST00000550016 ADORA1P30542 326 aa23.88■■□□□ 1.41
DDX54-207ENST00000550016 FKBP1AP62942 108 aaKnown RBP23.88■■□□□ 1.41
DDX54-207ENST00000550016 XAGE2Q96GT9 111 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms