RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 HMMRO75330 724 aa18.54■□□□□ 0.56
GPN3-206ENST00000549963 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
GPN3-206ENST00000549963 CAVIN4Q5BKX8 364 aa18.54■□□□□ 0.56
GPN3-206ENST00000549963 VPS37DQ86XT2 251 aa18.54■□□□□ 0.56
GPN3-206ENST00000549963 SSH3Q8TE77 659 aa18.54■□□□□ 0.56
GPN3-206ENST00000549963 NMRK2Q9NPI5 230 aa18.54■□□□□ 0.56
GPN3-206ENST00000549963 OS9Q13438 667 aaPredicted RBP18.53■□□□□ 0.56
GPN3-206ENST00000549963 PUM3Q15397 648 aaKnown RBP18.53■□□□□ 0.56
GPN3-206ENST00000549963 ATG9AQ7Z3C6 839 aa18.53■□□□□ 0.56
GPN3-206ENST00000549963 L3MBTL3Q96JM7 780 aaPredicted RBP18.53■□□□□ 0.56
GPN3-206ENST00000549963 AKAP2Q9Y2D5 859 aa18.53■□□□□ 0.56
GPN3-206ENST00000549963 USP17L3A6NCW0 530 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 USP17L4A6NCW7 530 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 YDJCA8MPS7 323 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 SLC5A1P13866 664 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 POLA2Q14181 598 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 CEP85Q6P2H3 762 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 USP17L1Q7RTZ2 530 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 HACL1Q9UJ83 578 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 COL4A5P29400 1685 aa18.52■□□□□ 0.56
GPN3-206ENST00000549963 A0A1B0GUL6 1792 aa18.52■□□□□ 0.55
GPN3-206ENST00000549963 WDR90Q96KV7 1748 aa18.52■□□□□ 0.55
GPN3-206ENST00000549963 SCN4AP35499 1836 aa18.51■□□□□ 0.55
GPN3-206ENST00000549963 SNAP23O00161 211 aa18.51■□□□□ 0.55
GPN3-206ENST00000549963 SURF6O75683 361 aaKnown RBP18.51■□□□□ 0.55
GPN3-206ENST00000549963 HIBADHP31937 336 aaKnown RBP18.51■□□□□ 0.55
GPN3-206ENST00000549963 TXNRD3Q86VQ6 643 aa18.51■□□□□ 0.55
GPN3-206ENST00000549963 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
GPN3-206ENST00000549963 LPIN2Q92539 896 aa18.51■□□□□ 0.55
GPN3-206ENST00000549963 PSMD14O00487 310 aa18.5■□□□□ 0.55
GPN3-206ENST00000549963 RPS12P25398 132 aaKnown RBP18.5■□□□□ 0.55
GPN3-206ENST00000549963 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
GPN3-206ENST00000549963 FBXW7Q969H0 707 aa18.5■□□□□ 0.55
GPN3-206ENST00000549963 CD209Q9NNX6 404 aa18.5■□□□□ 0.55
GPN3-206ENST00000549963 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
GPN3-206ENST00000549963 H7C1D1 291 aa18.49■□□□□ 0.55
GPN3-206ENST00000549963 FRAT2O75474 233 aaPredicted RBP18.49■□□□□ 0.55
GPN3-206ENST00000549963 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
GPN3-206ENST00000549963 ATP2B3Q16720 1220 aa18.49■□□□□ 0.55
GPN3-206ENST00000549963 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
GPN3-206ENST00000549963 PNMA8AQ86V59 439 aaPredicted RBP18.49■□□□□ 0.55
GPN3-206ENST00000549963 KCNQ5Q9NR82 932 aa18.49■□□□□ 0.55
GPN3-206ENST00000549963 KIF3CO14782 793 aa18.48■□□□□ 0.55
GPN3-206ENST00000549963 TOMM70O94826 608 aa18.48■□□□□ 0.55
GPN3-206ENST00000549963 KLRK1P26718 216 aa18.48■□□□□ 0.55
GPN3-206ENST00000549963 GMPSP49915 693 aaPredicted RBP18.48■□□□□ 0.55
GPN3-206ENST00000549963 STRIP1Q5VSL9 837 aa18.48■□□□□ 0.55
GPN3-206ENST00000549963 DPF2Q92785 391 aa18.48■□□□□ 0.55
GPN3-206ENST00000549963 FAM84BQ96KN1 310 aaPredicted RBP18.48■□□□□ 0.55
GPN3-206ENST00000549963 GNL3LQ9NVN8 582 aaKnown RBP18.48■□□□□ 0.55
GPN3-206ENST00000549963 NOP58Q9Y2X3 529 aaKnown RBP18.48■□□□□ 0.55
GPN3-206ENST00000549963 IL1R1P14778 569 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 FGFR2P21802 821 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 EPHX2P34913 555 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 GYG1P46976 350 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 TFCP2Q12800 502 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 AAMPQ13685 434 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 RSBN1LQ6PCB5 846 aaPredicted RBP18.47■□□□□ 0.55
GPN3-206ENST00000549963 ERC1Q8IUD2 1116 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 AGBL3Q8NEM8 1001 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 GPRC5DQ9NZD1 345 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 CNOT7Q9UIV1 285 aaKnown RBP18.47■□□□□ 0.55
GPN3-206ENST00000549963 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
GPN3-206ENST00000549963 POTECB2RU33 542 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 SASH1O94885 1247 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 GTF2IP78347 998 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 FBXO33Q7Z6M2 555 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
GPN3-206ENST00000549963 IRS2Q9Y4H2 1338 aa18.46■□□□□ 0.55
GPN3-206ENST00000549963 PSME4Q14997 1843 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 SCN9AQ15858 1988 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 MMP14P50281 582 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 SCNN1DP51172 638 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 GORABQ5T7V8 394 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 OGFOD1Q8N543 542 aa18.45■□□□□ 0.54
GPN3-206ENST00000549963 TDRD7Q8NHU6 1098 aaKnown RBP18.45■□□□□ 0.54
GPN3-206ENST00000549963 ADARB2Q9NS39 739 aaKnown RBP18.45■□□□□ 0.54
GPN3-206ENST00000549963 ZBTB12Q9Y330 459 aaPredicted RBP18.45■□□□□ 0.54
GPN3-206ENST00000549963 EPS15P42566 896 aa18.44■□□□□ 0.54
GPN3-206ENST00000549963 BCAMP50895 628 aa18.44■□□□□ 0.54
GPN3-206ENST00000549963 TIMM10P62072 90 aa18.44■□□□□ 0.54
GPN3-206ENST00000549963 EAPPQ56P03 285 aaPredicted RBP18.44■□□□□ 0.54
GPN3-206ENST00000549963 USP50Q70EL3 339 aaPredicted RBP18.44■□□□□ 0.54
GPN3-206ENST00000549963 RBM46Q8TBY0 533 aaKnown RBP18.44■□□□□ 0.54
GPN3-206ENST00000549963 CRBNQ96SW2 442 aa18.44■□□□□ 0.54
GPN3-206ENST00000549963 CLEC11AQ9Y240 323 aa18.44■□□□□ 0.54
GPN3-206ENST00000549963 A0A1B0GUL7 405 aa18.43■□□□□ 0.54
GPN3-206ENST00000549963 DACT2Q5SW24 774 aa18.43■□□□□ 0.54
GPN3-206ENST00000549963 MICALL2Q8IY33 904 aa18.43■□□□□ 0.54
GPN3-206ENST00000549963 GPR108Q9NPR9 543 aa18.43■□□□□ 0.54
GPN3-206ENST00000549963 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
GPN3-206ENST00000549963 RAB11FIP3O75154 756 aa18.42■□□□□ 0.54
GPN3-206ENST00000549963 USP17L8P0C7I0 530 aa18.42■□□□□ 0.54
GPN3-206ENST00000549963 FKBP1AP62942 108 aaKnown RBP18.42■□□□□ 0.54
GPN3-206ENST00000549963 SMC1BQ8NDV3 1235 aa18.42■□□□□ 0.54
GPN3-206ENST00000549963 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
GPN3-206ENST00000549963 FSTL1Q12841 308 aa18.41■□□□□ 0.54
GPN3-206ENST00000549963 LDHDQ86WU2 507 aa18.41■□□□□ 0.54
GPN3-206ENST00000549963 TBC1D22AQ8WUA7 517 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms