RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 CASP7P55210 303 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 GSDMDP57764 484 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 CCZ1BP86790 482 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 CCZ1P86791 482 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 APOBRQ0VD83 1088 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 PTPN14Q15678 1187 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 RAPGEF4Q8WZA2 1011 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 ZNF496Q96IT1 587 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.565e-8■■□□□ 11.6
SMARCD1-205ENST00000548573 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 PLEKHG2Q9H7P9 1386 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 ABCC6O95255 1503 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 A0A1W2PQ27 194 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 A0A1W2PQ64 194 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 A0A1W2PQD8 194 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 CCDC69A6NI79 296 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 E7EWF7 191 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 KIF2AO00139 706 aaPredicted RBP11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 ADALQ6DHV7 355 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 FSIP1Q8NA03 581 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 FTOQ9C0B1 505 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 PAG1Q9NWQ8 432 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 IMPACTQ9P2X3 320 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 MST1RQ04912 1400 aa11.55□□□□□ -0.56
SMARCD1-205ENST00000548573 A0A087WZG4 1122 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 PDIA3P30101 505 aaKnown RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 ME1P48163 572 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 EVCP57679 992 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 FMR1NBQ8N0W7 255 aaPredicted RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 MRPS27Q92552 414 aaKnown RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 RBM33Q96EV2 1170 aaKnown RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 BPIFA3Q9BQP9 254 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 OSBPL5Q9H0X9 879 aaPredicted RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 RTEL1Q9NZ71 1219 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 DDX41Q9UJV9 622 aaKnown RBP11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 SPEF2Q9C093 1822 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
SMARCD1-205ENST00000548573 USP27XA6NNY8 438 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 HSPD1P10809 573 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 DHX8Q14562 1220 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 ARID5BQ14865 1188 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 CCAR2Q8N163 923 aaKnown RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 PLBD2Q8NHP8 589 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 FMNL2Q96PY5 1086 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 RGPD5Q99666 1765 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 KIF1AQ12756 1690 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 GOLIM4O00461 696 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 FILIP1Q7Z7B0 1213 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 IFNL2Q8IZJ0 200 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 TTC5Q8N0Z6 440 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 ZNF592Q92610 1267 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
SMARCD1-205ENST00000548573 H7C1W4 665 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 FOXO4P98177 505 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 GABPB1Q06547 395 aaPredicted RBP11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 LMBR1LQ6UX01 489 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 ATG9AQ7Z3C6 839 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 ZNF397Q8NF99 534 aaPredicted RBP11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 ERO1AQ96HE7 468 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 NCOA5Q9HCD5 579 aaKnown RBP11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 LAMB4A4D0S4 1761 aa11.52□□□□□ -0.57
SMARCD1-205ENST00000548573 ATP5J2-PTCD1G3V325 749 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 RNF113AO15541 343 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 PTCD1O75127 700 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 YEATS4O95619 227 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 FDPSP14324 419 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 IL15P40933 162 aaPredicted RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 KCNJ6P48051 423 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 FOSBP53539 338 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 LINC00301Q8NCQ3 95 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 KIF18AQ8NI77 898 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 KCNG4Q8TDN1 519 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 SDF4Q9BRK5 362 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 MAST3O60307 1309 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 NAA30Q147X3 362 aaPredicted RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 SLFNL1Q499Z3 407 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 NBPF11Q86T75 865 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 CCDC150Q8NCX0 1101 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 RGS22Q8NE09 1264 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
SMARCD1-205ENST00000548573 DHX16O60231 1041 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 TUBB4AP04350 444 aa11.5□□□□□ -0.57
SMARCD1-205ENST00000548573 GUCY1B3Q02153 619 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms