RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 DCAF8Q5TAQ9 597 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 CHMP4AQ9BY43 222 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 GGA1Q9UJY5 639 aa12.59□□□□□ -0.39
SLC48A1-206ENST00000548498 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 ZBTB22O15209 634 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 HABP4Q5JVS0 413 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 MRS2Q9HD23 443 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
SLC48A1-206ENST00000548498 SSC5DA1L4H1 1573 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 FKTNO75072 461 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 CFHR5Q9BXR6 569 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 HYPKQ9NX55 129 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 XDHP47989 1333 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
SLC48A1-206ENST00000548498 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 SASH1O94885 1247 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 FZD1Q9UP38 647 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 CEP290O15078 2479 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 MED23Q9ULK4 1368 aa12.56□□□□□ -0.4
SLC48A1-206ENST00000548498 WNT10BO00744 389 aa12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 PRKG1Q13976 671 aa12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 DACT2Q5SW24 774 aa12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 WDR63Q8IWG1 891 aa12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 ZBTB38Q8NAP3 1195 aaPredicted RBP12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
SLC48A1-206ENST00000548498 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
SLC48A1-206ENST00000548498 PODNQ7Z5L7 613 aa12.54□□□□□ -0.4
SLC48A1-206ENST00000548498 C8orf58Q8NAV2 365 aa12.54□□□□□ -0.4
SLC48A1-206ENST00000548498 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
SLC48A1-206ENST00000548498 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
SLC48A1-206ENST00000548498 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
SLC48A1-206ENST00000548498 NF2P35240 595 aa12.53□□□□□ -0.4
SLC48A1-206ENST00000548498 CCDC152Q4G0S7 254 aa12.53□□□□□ -0.4
SLC48A1-206ENST00000548498 OTOP1Q7RTM1 612 aa12.53□□□□□ -0.4
SLC48A1-206ENST00000548498 MYD88Q99836 296 aa12.53□□□□□ -0.4
SLC48A1-206ENST00000548498 IGF2BP3O00425 579 aaKnown RBP eCLIP12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 PDE8AO60658 829 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 ATP2B4P23634 1241 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 FXR1P51114 621 aaKnown RBP eCLIP12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 RIC3Q7Z5B4 369 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 ANKRD18AQ8IVF6 992 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 ANGEL1Q9UNK9 670 aaKnown RBP12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 ZNF521Q96K83 1311 aa12.52□□□□□ -0.41
SLC48A1-206ENST00000548498 PCCAP05165 728 aaPredicted RBP12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 CAP1Q01518 475 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 ARMC9Q7Z3E5 817 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 TXNRD3Q86VQ6 643 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 SZT2Q5T011 3432 aa12.51□□□□□ -0.41
SLC48A1-206ENST00000548498 KLRK1P26718 216 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 APOBEC3FQ8IUX4 373 aaKnown RBP12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 OGFOD1Q8N543 542 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 CD99L2Q8TCZ2 262 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 CLMNQ96JQ2 1002 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
SLC48A1-206ENST00000548498 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 EN2P19622 333 aaPredicted RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 CTSWP56202 376 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 KIAA0825Q8IV33 1275 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 ZBED3Q96IU2 234 aaPredicted RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 WNK4Q96J92 1243 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 CWC25Q9NXE8 425 aaPredicted RBP12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 PTPN22Q9Y2R2 807 aa12.49□□□□□ -0.41
SLC48A1-206ENST00000548498 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
SLC48A1-206ENST00000548498 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
SLC48A1-206ENST00000548498 CRHR2Q13324 411 aa12.48□□□□□ -0.41
SLC48A1-206ENST00000548498 ARMC5Q96C12 935 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms