RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NSFL1CQ9UNZ2 370 aaKnown RBP6.71□□□□□ -1.34
PTCH1-216ENST00000548379 IGF1RP08069 1367 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 TRPA1O75762 1119 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 ADH7P40394 386 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
PTCH1-216ENST00000548379 SLCO4C1Q6ZQN7 724 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 HFE2Q6ZVN8 426 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 TTC9Q92623 222 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 RNF34Q969K3 372 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 SPACA7Q96KW9 195 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 LPIN3Q9BQK8 851 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 RASSF4Q9H2L5 321 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 FRRS1LQ9P0K9 344 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 PPM1HQ9ULR3 514 aa6.7□□□□□ -1.34
PTCH1-216ENST00000548379 ELOA3CA0A087WX78 387 aaPredicted RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 ELOA3DA6NLF2 546 aaPredicted RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 NEURL1BA8MQ27 555 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 PDE2AO00408 941 aaPredicted RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 GHRHP01286 108 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 FCGRTP55899 365 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 ATP11AP98196 1134 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 MAP3K10Q02779 954 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 ELOA3BQ3SY89 546 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 PERM1Q5SV97 790 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 ELOA3Q8NG57 546 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 C8orf37Q96NL8 207 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 OXCT2Q9BYC2 517 aaPredicted RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 GGA1Q9UJY5 639 aa6.69□□□□□ -1.34
PTCH1-216ENST00000548379 GDF2Q9UK05 429 aaPredicted RBP6.69□□□□□ -1.34
PTCH1-216ENST00000548379 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
PTCH1-216ENST00000548379 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 FAM35AQ86V20 835 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 NT5DC4Q86YG4 428 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 GOLGA6L1Q8N7Z2 621 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 SLC16A10Q8TF71 515 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 PLD4Q96BZ4 506 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 NOC4LQ9BVI4 516 aaKnown RBP6.68□□□□□ -1.34
PTCH1-216ENST00000548379 IGFLR1Q9H665 355 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 ZFYVE1Q9HBF4 777 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 STARD13Q9Y3M8 1113 aa6.68□□□□□ -1.34
PTCH1-216ENST00000548379 A0A096LPE4 126 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 A0A1W2PPZ6 126 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 METTL12A8MUP2 240 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 EPXP11678 715 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 CPB1P15086 417 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 EIF2AK2P19525 551 aaKnown RBP6.67□□□□□ -1.34
PTCH1-216ENST00000548379 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 IRF7Q92985 503 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 ACDQ96AP0 544 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 ADAM19Q9H013 955 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 ZNF576Q9H609 170 aa6.67□□□□□ -1.34
PTCH1-216ENST00000548379 SMNDC1O75940 238 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTCH1-216ENST00000548379 SLURP2P0DP57 97 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 ERCC5P28715 1186 aaPredicted RBP6.66□□□□□ -1.34
PTCH1-216ENST00000548379 TBC1D8BQ0IIM8 1120 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 GRIK5Q16478 980 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 DTHD1Q6ZMT9 781 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 C20orf204Q6ZNR8 217 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 C1orf229Q6ZS94 237 aaPredicted RBP6.66□□□□□ -1.34
PTCH1-216ENST00000548379 TGIF2Q9GZN2 237 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
PTCH1-216ENST00000548379 ADAMTS2O95450 1211 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 ZC3H6P61129 1189 aaKnown RBP6.65□□□□□ -1.34
PTCH1-216ENST00000548379 CEP135Q66GS9 1140 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 PSAPL1Q6NUJ1 521 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 SV2BQ7L1I2 683 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 HS2ST1Q7LGA3 356 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 BSNDQ8WZ55 320 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 RSRP1Q9BUV0 290 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 SMG9Q9H0W8 520 aaKnown RBP6.65□□□□□ -1.34
PTCH1-216ENST00000548379 MUC3BQ9H195 1237 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
PTCH1-216ENST00000548379 LRRC4BQ9NT99 713 aa6.65□□□□□ -1.34
PTCH1-216ENST00000548379 DDX41Q9UJV9 622 aaKnown RBP6.65□□□□□ -1.34
PTCH1-216ENST00000548379 RACK1P63244 317 aaKnown RBP6.64□□□□□ -1.35
PTCH1-216ENST00000548379 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 ELMSAN1Q6PJG2 1045 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 ILDR2Q71H61 639 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 VN1R5Q7Z5H4 357 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 CACTIN-AS1Q8N1I8 211 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
PTCH1-216ENST00000548379 SEC31BQ9NQW1 1179 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 TTF2Q9UNY4 1162 aaKnown RBP6.64□□□□□ -1.35
PTCH1-216ENST00000548379 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 AKAP2Q9Y2D5 859 aa6.64□□□□□ -1.35
PTCH1-216ENST00000548379 PTPRAP18433 802 aa6.63□□□□□ -1.35
PTCH1-216ENST00000548379 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
PTCH1-216ENST00000548379 CLEC4MQ9H2X3 399 aaPredicted RBP6.63□□□□□ -1.35
PTCH1-216ENST00000548379 ENC1O14682 589 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 OIP5O43482 229 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 ALBP02768 609 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 ALAS2P22557 587 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 BAG6P46379 1132 aa6.62□□□□□ -1.35
PTCH1-216ENST00000548379 ZNF394Q53GI3 561 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms