RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 SNAP23O00161 211 aa17.96■□□□□ 0.47
DDX54-203ENST00000546869 AAMPQ13685 434 aa17.96■□□□□ 0.47
DDX54-203ENST00000546869 PUM3Q15397 648 aaKnown RBP17.96■□□□□ 0.47
DDX54-203ENST00000546869 DCAF8Q5TAQ9 597 aa17.96■□□□□ 0.47
DDX54-203ENST00000546869 SIL1Q9H173 461 aa17.96■□□□□ 0.47
DDX54-203ENST00000546869 POTECB2RU33 542 aa17.95■□□□□ 0.46
DDX54-203ENST00000546869 IL1R1P14778 569 aa17.95■□□□□ 0.46
DDX54-203ENST00000546869 VEGFAP15692 232 aaPredicted RBP17.95■□□□□ 0.46
DDX54-203ENST00000546869 KLRK1P26718 216 aa17.95■□□□□ 0.46
DDX54-203ENST00000546869 G3BP1Q13283 466 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX54-203ENST00000546869 LPIN2Q92539 896 aa17.95■□□□□ 0.46
DDX54-203ENST00000546869 IQCA1LA6NCM1 817 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 ZBTB22O15209 634 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 HMMRO75330 724 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
DDX54-203ENST00000546869 ZNF804AQ7Z570 1209 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 FBXO33Q7Z6M2 555 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 FAM84BQ96KN1 310 aaPredicted RBP17.94■□□□□ 0.46
DDX54-203ENST00000546869 CD209Q9NNX6 404 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 AKAP2Q9Y2D5 859 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 WDR90Q96KV7 1748 aa17.94■□□□□ 0.46
DDX54-203ENST00000546869 RAD17O75943 681 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 IFIT1P09914 478 aaKnown RBP17.93■□□□□ 0.46
DDX54-203ENST00000546869 RPS12P25398 132 aaKnown RBP17.93■□□□□ 0.46
DDX54-203ENST00000546869 SIRT2Q8IXJ6 389 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
DDX54-203ENST00000546869 DPF2Q92785 391 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 RRAGCQ9HB90 399 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 SUPT16HQ9Y5B9 1047 aaKnown RBP17.93■□□□□ 0.46
DDX54-203ENST00000546869 A0A1B0GUL6 1792 aa17.93■□□□□ 0.46
DDX54-203ENST00000546869 ZNF609O15014 1411 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 PSMD14O00487 310 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 KIF3CO14782 793 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
DDX54-203ENST00000546869 SLC5A1P13866 664 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 HIBADHP31937 336 aaKnown RBP17.92■□□□□ 0.46
DDX54-203ENST00000546869 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 CAVIN4Q5BKX8 364 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 STRIP1Q5VSL9 837 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 GPR108Q9NPR9 543 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 KCNQ5Q9NR82 932 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
DDX54-203ENST00000546869 SASH1O94885 1247 aa17.91■□□□□ 0.46
DDX54-203ENST00000546869 MMP14P50281 582 aa17.91■□□□□ 0.46
DDX54-203ENST00000546869 TFCP2Q12800 502 aa17.91■□□□□ 0.46
DDX54-203ENST00000546869 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
DDX54-203ENST00000546869 AGBL3Q8NEM8 1001 aa17.91■□□□□ 0.46
DDX54-203ENST00000546869 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
DDX54-203ENST00000546869 SCNN1DP51172 638 aa17.9■□□□□ 0.46
DDX54-203ENST00000546869 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
DDX54-203ENST00000546869 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
DDX54-203ENST00000546869 GYG1P46976 350 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 GMPSP49915 693 aaPredicted RBP17.89■□□□□ 0.45
DDX54-203ENST00000546869 FKBP1AP62942 108 aaKnown RBP17.89■□□□□ 0.45
DDX54-203ENST00000546869 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 RSBN1LQ6PCB5 846 aaPredicted RBP17.89■□□□□ 0.45
DDX54-203ENST00000546869 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 GMLQ99445 158 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 GPRC5DQ9NZD1 345 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 MYO3BQ8WXR4 1341 aa17.89■□□□□ 0.45
DDX54-203ENST00000546869 LMOD1P29536 600 aaPredicted RBP17.88■□□□□ 0.45
DDX54-203ENST00000546869 PNMA8AQ86V59 439 aaPredicted RBP17.88■□□□□ 0.45
DDX54-203ENST00000546869 VPS37DQ86XT2 251 aa17.88■□□□□ 0.45
DDX54-203ENST00000546869 TAF1DQ9H5J8 278 aaPredicted RBP17.88■□□□□ 0.45
DDX54-203ENST00000546869 FAM205AQ6ZU69 1335 aa17.88■□□□□ 0.45
DDX54-203ENST00000546869 SCN4AP35499 1836 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 A0A1B0GUL7 405 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 TOMM70O94826 608 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 BCAMP50895 628 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 TIMM10P62072 90 aa17.87■□□□□ 0.45
DDX54-203ENST00000546869 EPHX2P34913 555 aa17.86■□□□□ 0.45
DDX54-203ENST00000546869 EPS15P42566 896 aa17.86■□□□□ 0.45
DDX54-203ENST00000546869 GTF2IP78347 998 aa17.86■□□□□ 0.45
DDX54-203ENST00000546869 OS9Q13438 667 aaPredicted RBP17.86■□□□□ 0.45
DDX54-203ENST00000546869 USP50Q70EL3 339 aaPredicted RBP17.86■□□□□ 0.45
DDX54-203ENST00000546869 CNOT7Q9UIV1 285 aaKnown RBP17.86■□□□□ 0.45
DDX54-203ENST00000546869 ZBTB12Q9Y330 459 aaPredicted RBP17.86■□□□□ 0.45
DDX54-203ENST00000546869 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
DDX54-203ENST00000546869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.86■□□□□ 0.45
DDX54-203ENST00000546869 H7C1D1 291 aa17.85■□□□□ 0.45
DDX54-203ENST00000546869 SEMA3EO15041 775 aa17.85■□□□□ 0.45
DDX54-203ENST00000546869 SCN9AQ15858 1988 aa17.85■□□□□ 0.45
DDX54-203ENST00000546869 RBM46Q8TBY0 533 aaKnown RBP17.85■□□□□ 0.45
DDX54-203ENST00000546869 DCTPP1Q9H773 170 aa17.85■□□□□ 0.45
DDX54-203ENST00000546869 ADARB2Q9NS39 739 aaKnown RBP17.85■□□□□ 0.45
DDX54-203ENST00000546869 GNL3LQ9NVN8 582 aaKnown RBP17.85■□□□□ 0.45
DDX54-203ENST00000546869 EXOC6BQ9Y2D4 811 aa17.85■□□□□ 0.45
DDX54-203ENST00000546869 ZNF280AP59817 542 aaPredicted RBP17.84■□□□□ 0.45
DDX54-203ENST00000546869 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
DDX54-203ENST00000546869 C16orf71Q8IYS4 520 aaPredicted RBP17.84■□□□□ 0.45
DDX54-203ENST00000546869 RHPN1Q8TCX5 695 aa17.84■□□□□ 0.45
DDX54-203ENST00000546869 KIF1BPQ96EK5 621 aa17.84■□□□□ 0.45
DDX54-203ENST00000546869 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
DDX54-203ENST00000546869 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms