RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 GGA1Q9UJY5 639 aa11.98□□□□□ -0.49
SSH1-203ENST00000546433 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
SSH1-203ENST00000546433 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
SSH1-203ENST00000546433 PRDM15P57071 1507 aaPredicted RBP11.97□□□□□ -0.49
SSH1-203ENST00000546433 ALDH1L1O75891 902 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 TAF3Q5VWG9 929 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 CGNQ9P2M7 1197 aaKnown RBP11.97□□□□□ -0.49
SSH1-203ENST00000546433 BMP15O95972 392 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 TAX1BP1Q86VP1 789 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 TMEM87AQ8NBN3 555 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 CALML4Q96GE6 196 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 ANKRD62A6NC57 917 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 CCDC96Q2M329 555 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 KLHL40Q2TBA0 621 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 FAM193AP78312 1265 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 TCP11L1Q9NUJ3 509 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
SSH1-203ENST00000546433 C1orf167Q5SNV9 1468 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 GOLIM4O00461 696 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 TMEM67Q5HYA8 995 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 KLHL10Q6JEL2 608 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 EYA1Q99502 592 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
SSH1-203ENST00000546433 PAFAH1B1P43034 410 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 LDHAL6AQ6ZMR3 332 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 SLC16A10Q8TF71 515 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 NSFL1CQ9UNZ2 370 aaKnown RBP11.96□□□□□ -0.5
SSH1-203ENST00000546433 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.5
SSH1-203ENST00000546433 PLCG2P16885 1265 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 MFSD6Q6ZSS7 791 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.5
SSH1-203ENST00000546433 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
SSH1-203ENST00000546433 CETN1Q12798 172 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 NUP88Q99567 741 aaPredicted RBP11.95□□□□□ -0.5
SSH1-203ENST00000546433 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
SSH1-203ENST00000546433 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 GPBP1L1Q9HC44 474 aaPredicted RBP11.95□□□□□ -0.5
SSH1-203ENST00000546433 KIF24Q5T7B8 1368 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 NEBLO76041 1014 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 ADRA2BP18089 450 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 CCDC93Q567U6 631 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 ALS2CR12Q96Q35 445 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 CRB1P82279 1406 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 SHTN1A0MZ66 631 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 TNFAIP1Q13829 316 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 CCDC91Q7Z6B0 441 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 KRT23Q9C075 422 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 ORC3Q9UBD5 711 aaPredicted RBP11.95□□□□□ -0.5
SSH1-203ENST00000546433 RNF17Q9BXT8 1623 aaKnown RBP11.95□□□□□ -0.5
SSH1-203ENST00000546433 SULF1Q8IWU6 871 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 RTKN2Q8IZC4 609 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 KAT14Q9H8E8 782 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 RMND1Q9NWS8 449 aa11.95□□□□□ -0.5
SSH1-203ENST00000546433 INO80Q9ULG1 1556 aaPredicted RBP11.94□□□□□ -0.5
SSH1-203ENST00000546433 LOC102724428A0A0B4J2F2 783 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 URI1O94763 535 aaPredicted RBP11.94□□□□□ -0.5
SSH1-203ENST00000546433 SIK1P57059 783 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 CCT2P78371 535 aaKnown RBP11.94□□□□□ -0.5
SSH1-203ENST00000546433 ANKRD44Q8N8A2 993 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 RIMBP2O15034 1052 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 SSR1P43307 286 aaKnown RBP11.94□□□□□ -0.5
SSH1-203ENST00000546433 CCDC102BQ68D86 513 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 NAA15Q9BXJ9 866 aaKnown RBP11.94□□□□□ -0.5
SSH1-203ENST00000546433 CNNM2Q9H8M5 875 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 ZBTB7AO95365 584 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 UFL1O94874 794 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 LUZP1Q86V48 1076 aa11.94□□□□□ -0.5
SSH1-203ENST00000546433 IQCA1LA6NCM1 817 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 IGHDP01880 384 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 ZSCAN22P10073 491 aaPredicted RBP11.93□□□□□ -0.5
SSH1-203ENST00000546433 TRAF1Q13077 416 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 CRNKL1Q9BZJ0 848 aaKnown RBP11.93□□□□□ -0.5
SSH1-203ENST00000546433 USP25Q9UHP3 1055 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 TNNT1P13805 278 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
SSH1-203ENST00000546433 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 MTIF2P46199 727 aaKnown RBP11.93□□□□□ -0.5
SSH1-203ENST00000546433 TMOD4Q9NZQ9 345 aa11.93□□□□□ -0.5
SSH1-203ENST00000546433 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 XAGE3Q8WTP9 111 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 SNX21Q969T3 373 aa11.92□□□□□ -0.5
SSH1-203ENST00000546433 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
SSH1-203ENST00000546433 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms