RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 POLA2Q14181 598 aa20.87■□□□□ 0.93
LTBR-215ENST00000546296 SSH3Q8TE77 659 aa20.87■□□□□ 0.93
LTBR-215ENST00000546296 SUPT16HQ9Y5B9 1047 aaKnown RBP20.87■□□□□ 0.93
LTBR-215ENST00000546296 VEGFAP15692 232 aaPredicted RBP20.86■□□□□ 0.93
LTBR-215ENST00000546296 OS9Q13438 667 aaPredicted RBP20.86■□□□□ 0.93
LTBR-215ENST00000546296 PUM3Q15397 648 aaKnown RBP20.86■□□□□ 0.93
LTBR-215ENST00000546296 C15orf52Q6ZUT6 534 aaKnown RBP20.86■□□□□ 0.93
LTBR-215ENST00000546296 ZNF804AQ7Z570 1209 aa20.86■□□□□ 0.93
LTBR-215ENST00000546296 PODNQ7Z5L7 613 aa20.86■□□□□ 0.93
LTBR-215ENST00000546296 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
LTBR-215ENST00000546296 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
LTBR-215ENST00000546296 IFIT1P09914 478 aaKnown RBP20.85■□□□□ 0.93
LTBR-215ENST00000546296 RPAP2Q8IXW5 612 aaPredicted RBP20.85■□□□□ 0.93
LTBR-215ENST00000546296 VGLL2Q8N8G2 317 aa20.85■□□□□ 0.93
LTBR-215ENST00000546296 VPS37DQ86XT2 251 aa20.84■□□□□ 0.93
LTBR-215ENST00000546296 C16orf71Q8IYS4 520 aaPredicted RBP20.84■□□□□ 0.93
LTBR-215ENST00000546296 FBXW7Q969H0 707 aa20.84■□□□□ 0.93
LTBR-215ENST00000546296 CRBNQ96SW2 442 aa20.84■□□□□ 0.93
LTBR-215ENST00000546296 IQCA1LA6NCM1 817 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 PSMD14O00487 310 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 HMMRO75330 724 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 SLC5A1P13866 664 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 LMOD1P29536 600 aaPredicted RBP20.83■□□□□ 0.93
LTBR-215ENST00000546296 CAVIN4Q5BKX8 364 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 LPIN2Q92539 896 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 L3MBTL3Q96JM7 780 aaPredicted RBP20.83■□□□□ 0.93
LTBR-215ENST00000546296 CD209Q9NNX6 404 aa20.83■□□□□ 0.93
LTBR-215ENST00000546296 USP17L3A6NCW0 530 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 USP17L4A6NCW7 530 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 HIBADHP31937 336 aaKnown RBP20.82■□□□□ 0.92
LTBR-215ENST00000546296 GYG1P46976 350 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 GMPSP49915 693 aaPredicted RBP20.82■□□□□ 0.92
LTBR-215ENST00000546296 TFCP2Q12800 502 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 ATP2B3Q16720 1220 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 USP17L1Q7RTZ2 530 aa20.82■□□□□ 0.92
LTBR-215ENST00000546296 IRS2Q9Y4H2 1338 aa20.81■□□□□ 0.92
LTBR-215ENST00000546296 POTECB2RU33 542 aa20.81■□□□□ 0.92
LTBR-215ENST00000546296 FGFR2P21802 821 aa20.81■□□□□ 0.92
LTBR-215ENST00000546296 FAM84BQ96KN1 310 aaPredicted RBP20.81■□□□□ 0.92
LTBR-215ENST00000546296 HACL1Q9UJ83 578 aa20.81■□□□□ 0.92
LTBR-215ENST00000546296 AKAP2Q9Y2D5 859 aa20.81■□□□□ 0.92
LTBR-215ENST00000546296 KIF3CO14782 793 aa20.8■□□□□ 0.92
LTBR-215ENST00000546296 VIL1P09327 827 aaKnown RBP20.8■□□□□ 0.92
LTBR-215ENST00000546296 NOP58Q9Y2X3 529 aaKnown RBP20.8■□□□□ 0.92
LTBR-215ENST00000546296 ZBTB12Q9Y330 459 aaPredicted RBP20.8■□□□□ 0.92
LTBR-215ENST00000546296 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
LTBR-215ENST00000546296 GTF2IP78347 998 aa20.79■□□□□ 0.92
LTBR-215ENST00000546296 TTLL5Q6EMB2 1281 aa20.79■□□□□ 0.92
LTBR-215ENST00000546296 IL1R1P14778 569 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 RPS12P25398 132 aaKnown RBP20.78■□□□□ 0.92
LTBR-215ENST00000546296 BCAMP50895 628 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 SCNN1DP51172 638 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 TIMM10P62072 90 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 RSBN1LQ6PCB5 846 aaPredicted RBP20.78■□□□□ 0.92
LTBR-215ENST00000546296 FBXO33Q7Z6M2 555 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 SIRT2Q8IXJ6 389 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 NEUROD6Q96NK8 337 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 TAF1DQ9H5J8 278 aaPredicted RBP20.78■□□□□ 0.92
LTBR-215ENST00000546296 EXOC6BQ9Y2D4 811 aa20.78■□□□□ 0.92
LTBR-215ENST00000546296 SASH1O94885 1247 aa20.77■□□□□ 0.92
LTBR-215ENST00000546296 EPHX2P34913 555 aa20.77■□□□□ 0.92
LTBR-215ENST00000546296 EPS15P42566 896 aa20.77■□□□□ 0.92
LTBR-215ENST00000546296 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.92
LTBR-215ENST00000546296 GPRC5DQ9NZD1 345 aa20.77■□□□□ 0.92
LTBR-215ENST00000546296 CNOT7Q9UIV1 285 aaKnown RBP20.77■□□□□ 0.92
LTBR-215ENST00000546296 WDR90Q96KV7 1748 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 A0A1B0GUL7 405 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 H7C1D1 291 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 EAPPQ56P03 285 aaPredicted RBP20.76■□□□□ 0.91
LTBR-215ENST00000546296 DACT2Q5SW24 774 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 TDRD7Q8NHU6 1098 aaKnown RBP20.76■□□□□ 0.91
LTBR-215ENST00000546296 DPF2Q92785 391 aa20.76■□□□□ 0.91
LTBR-215ENST00000546296 IQSEC3Q9UPP2 1182 aaPredicted RBP20.76■□□□□ 0.91
LTBR-215ENST00000546296 A0A1B0GUL6 1792 aa20.75■□□□□ 0.91
LTBR-215ENST00000546296 GORABQ5T7V8 394 aa20.75■□□□□ 0.91
LTBR-215ENST00000546296 AGBL3Q8NEM8 1001 aa20.75■□□□□ 0.91
LTBR-215ENST00000546296 MXD3Q9BW11 206 aa20.75■□□□□ 0.91
LTBR-215ENST00000546296 GNL3LQ9NVN8 582 aaKnown RBP20.75■□□□□ 0.91
LTBR-215ENST00000546296 JAG2Q9Y219 1238 aa20.75■□□□□ 0.91
LTBR-215ENST00000546296 APBB1O00213 710 aa20.74■□□□□ 0.91
LTBR-215ENST00000546296 TOMM70O94826 608 aa20.74■□□□□ 0.91
LTBR-215ENST00000546296 ADORA1P30542 326 aa20.74■□□□□ 0.91
LTBR-215ENST00000546296 CHAF1AQ13111 956 aaPredicted RBP20.74■□□□□ 0.91
LTBR-215ENST00000546296 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
LTBR-215ENST00000546296 MICALL2Q8IY33 904 aa20.74■□□□□ 0.91
LTBR-215ENST00000546296 ADARB2Q9NS39 739 aaKnown RBP20.74■□□□□ 0.91
LTBR-215ENST00000546296 CLEC11AQ9Y240 323 aa20.74■□□□□ 0.91
LTBR-215ENST00000546296 XAGE2Q96GT9 111 aa20.73■□□□□ 0.91
LTBR-215ENST00000546296 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
LTBR-215ENST00000546296 MYO3BQ8WXR4 1341 aa20.73■□□□□ 0.91
LTBR-215ENST00000546296 USP17L8P0C7I0 530 aa20.72■□□□□ 0.91
LTBR-215ENST00000546296 AAMPQ13685 434 aa20.72■□□□□ 0.91
LTBR-215ENST00000546296 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
LTBR-215ENST00000546296 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
LTBR-215ENST00000546296 PCDHB15Q9Y5E8 787 aa20.72■□□□□ 0.91
LTBR-215ENST00000546296 SHTN1A0MZ66 631 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 RAB11FIP3O75154 756 aa20.71■□□□□ 0.91
LTBR-215ENST00000546296 IRX6P78412 446 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms