RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ZNF804AQ7Z570 1209 aa22.24■■□□□ 1.15
TSFM-208ENST00000543727 HELBQ8NG08 1087 aaPredicted RBP22.24■■□□□ 1.15
TSFM-208ENST00000543727 KLHDC4Q8TBB5 520 aa22.24■■□□□ 1.15
TSFM-208ENST00000543727 GJA3Q9Y6H8 435 aa22.24■■□□□ 1.15
TSFM-208ENST00000543727 ADAMTSL1Q8N6G6 1762 aa22.23■■□□□ 1.15
TSFM-208ENST00000543727 POTECB2RU33 542 aa22.23■■□□□ 1.15
TSFM-208ENST00000543727 HACL1Q9UJ83 578 aa22.23■■□□□ 1.15
TSFM-208ENST00000543727 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
TSFM-208ENST00000543727 RAD17O75943 681 aa22.22■■□□□ 1.15
TSFM-208ENST00000543727 PUM3Q15397 648 aaKnown RBP22.22■■□□□ 1.15
TSFM-208ENST00000543727 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
TSFM-208ENST00000543727 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
TSFM-208ENST00000543727 DPF2Q92785 391 aa22.22■■□□□ 1.15
TSFM-208ENST00000543727 VIL1P09327 827 aaKnown RBP22.21■■□□□ 1.15
TSFM-208ENST00000543727 RRP1P56182 461 aaKnown RBP22.21■■□□□ 1.15
TSFM-208ENST00000543727 ATP8B2P98198 1209 aa22.21■■□□□ 1.15
TSFM-208ENST00000543727 POLA2Q14181 598 aa22.21■■□□□ 1.15
TSFM-208ENST00000543727 PNMA8AQ86V59 439 aaPredicted RBP22.21■■□□□ 1.15
TSFM-208ENST00000543727 SSH3Q8TE77 659 aa22.21■■□□□ 1.15
TSFM-208ENST00000543727 WTIPA6NIX2 430 aaPredicted RBP22.2■■□□□ 1.14
TSFM-208ENST00000543727 PSMD14O00487 310 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 SCNN1DP51172 638 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 TXNRD3Q86VQ6 643 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 TAF1DQ9H5J8 278 aaPredicted RBP22.2■■□□□ 1.14
TSFM-208ENST00000543727 ZBTB40Q9NUA8 1239 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 GPRC5DQ9NZD1 345 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 CEP126Q9P2H0 1117 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 MYO3BQ8WXR4 1341 aa22.2■■□□□ 1.14
TSFM-208ENST00000543727 PNMA6EA0A0J9YXQ4 647 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 USP17L3A6NCW0 530 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 USP17L4A6NCW7 530 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 IFIT1P09914 478 aaKnown RBP22.19■■□□□ 1.14
TSFM-208ENST00000543727 IL1R1P14778 569 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 KLRK1P26718 216 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 EPHX2P34913 555 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 MMP14P50281 582 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 STRIP1Q5VSL9 837 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 USP17L1Q7RTZ2 530 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 LPIN2Q92539 896 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 SIL1Q9H173 461 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 CD209Q9NNX6 404 aa22.19■■□□□ 1.14
TSFM-208ENST00000543727 FGFR2P21802 821 aa22.18■■□□□ 1.14
TSFM-208ENST00000543727 FSTL1Q12841 308 aa22.18■■□□□ 1.14
TSFM-208ENST00000543727 CAVIN4Q5BKX8 364 aa22.18■■□□□ 1.14
TSFM-208ENST00000543727 RPAP2Q8IXW5 612 aaPredicted RBP22.18■■□□□ 1.14
TSFM-208ENST00000543727 AGBL3Q8NEM8 1001 aa22.18■■□□□ 1.14
TSFM-208ENST00000543727 PA2G4Q9UQ80 394 aaKnown RBP22.18■■□□□ 1.14
TSFM-208ENST00000543727 SLC5A1P13866 664 aa22.17■■□□□ 1.14
TSFM-208ENST00000543727 GMPSP49915 693 aaPredicted RBP22.17■■□□□ 1.14
TSFM-208ENST00000543727 CEP85Q6P2H3 762 aa22.17■■□□□ 1.14
TSFM-208ENST00000543727 RSBN1LQ6PCB5 846 aaPredicted RBP22.17■■□□□ 1.14
TSFM-208ENST00000543727 SMC1BQ8NDV3 1235 aa22.17■■□□□ 1.14
TSFM-208ENST00000543727 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
TSFM-208ENST00000543727 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
TSFM-208ENST00000543727 SNAP23O00161 211 aa22.16■■□□□ 1.14
TSFM-208ENST00000543727 HIBADHP31937 336 aaKnown RBP22.16■■□□□ 1.14
TSFM-208ENST00000543727 C20orf194Q5TEA3 1177 aa22.16■■□□□ 1.14
TSFM-208ENST00000543727 USP50Q70EL3 339 aaPredicted RBP22.16■■□□□ 1.14
TSFM-208ENST00000543727 LDHDQ86WU2 507 aa22.16■■□□□ 1.14
TSFM-208ENST00000543727 AKAP2Q9Y2D5 859 aa22.16■■□□□ 1.14
TSFM-208ENST00000543727 ZBTB22O15209 634 aa22.15■■□□□ 1.14
TSFM-208ENST00000543727 HMMRO75330 724 aa22.15■■□□□ 1.14
TSFM-208ENST00000543727 C1QTNF8P60827 252 aa22.15■■□□□ 1.14
TSFM-208ENST00000543727 FKBP1AP62942 108 aaKnown RBP22.15■■□□□ 1.14
TSFM-208ENST00000543727 G3BP1Q13283 466 aaKnown RBP eCLIP22.15■■□□□ 1.14
TSFM-208ENST00000543727 VPS37DQ86XT2 251 aa22.15■■□□□ 1.14
TSFM-208ENST00000543727 FAM84BQ96KN1 310 aaPredicted RBP22.15■■□□□ 1.14
TSFM-208ENST00000543727 NOP58Q9Y2X3 529 aaKnown RBP22.15■■□□□ 1.14
TSFM-208ENST00000543727 H7C1D1 291 aa22.14■■□□□ 1.13
TSFM-208ENST00000543727 ATP2B3Q16720 1220 aa22.14■■□□□ 1.13
TSFM-208ENST00000543727 TTLL5Q6EMB2 1281 aa22.14■■□□□ 1.13
TSFM-208ENST00000543727 FBXO33Q7Z6M2 555 aa22.14■■□□□ 1.13
TSFM-208ENST00000543727 KCNQ5Q9NR82 932 aa22.14■■□□□ 1.13
TSFM-208ENST00000543727 SASH1O94885 1247 aa22.13■■□□□ 1.13
TSFM-208ENST00000543727 DACT2Q5SW24 774 aa22.13■■□□□ 1.13
TSFM-208ENST00000543727 TDRD7Q8NHU6 1098 aaKnown RBP22.13■■□□□ 1.13
TSFM-208ENST00000543727 CNOT7Q9UIV1 285 aaKnown RBP22.13■■□□□ 1.13
TSFM-208ENST00000543727 FAM205AQ6ZU69 1335 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 EPS15P42566 896 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 HSP90AB4PQ58FF6 505 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 MICALL2Q8IY33 904 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 GMLQ99445 158 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 ZBTB12Q9Y330 459 aaPredicted RBP22.12■■□□□ 1.13
TSFM-208ENST00000543727 ECM29Q5VYK3 1845 aa22.12■■□□□ 1.13
TSFM-208ENST00000543727 GYG1P46976 350 aa22.11■■□□□ 1.13
TSFM-208ENST00000543727 AAMPQ13685 434 aa22.11■■□□□ 1.13
TSFM-208ENST00000543727 ERC1Q8IUD2 1116 aa22.11■■□□□ 1.13
TSFM-208ENST00000543727 GPR108Q9NPR9 543 aa22.11■■□□□ 1.13
TSFM-208ENST00000543727 ZNF280AP59817 542 aaPredicted RBP22.1■■□□□ 1.13
TSFM-208ENST00000543727 GTF2IP78347 998 aa22.1■■□□□ 1.13
TSFM-208ENST00000543727 CHADLQ6NUI6 762 aa22.1■■□□□ 1.13
TSFM-208ENST00000543727 ZC3H15Q8WU90 426 aaKnown RBP22.1■■□□□ 1.13
TSFM-208ENST00000543727 SURF6O75683 361 aaKnown RBP22.09■■□□□ 1.13
TSFM-208ENST00000543727 USP17L8P0C7I0 530 aa22.09■■□□□ 1.13
TSFM-208ENST00000543727 TFCP2Q12800 502 aa22.09■■□□□ 1.13
TSFM-208ENST00000543727 OS9Q13438 667 aaPredicted RBP22.09■■□□□ 1.13
TSFM-208ENST00000543727 EAPPQ56P03 285 aaPredicted RBP22.09■■□□□ 1.13
TSFM-208ENST00000543727 OGFOD1Q8N543 542 aa22.09■■□□□ 1.13
TSFM-208ENST00000543727 TBC1D22AQ8WUA7 517 aa22.09■■□□□ 1.13
TSFM-208ENST00000543727 GNL3LQ9NVN8 582 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms