RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 DOCK2Q92608 1830 aa12.34□□□□□ -0.43
VEGFB-204ENST00000543462 POTECB2RU33 542 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 ECE2O60344 883 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 SASH1O94885 1247 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 NIM1KQ8IY84 436 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 DBNDD1Q9H9R9 158 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 PCDHB15Q9Y5E8 787 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 MAST2Q6P0Q8 1798 aa12.33□□□□□ -0.44
VEGFB-204ENST00000543462 IL1R1P14778 569 aa12.32□□□□□ -0.44
VEGFB-204ENST00000543462 CXCL9Q07325 125 aa12.32□□□□□ -0.44
VEGFB-204ENST00000543462 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
VEGFB-204ENST00000543462 JDP2Q8WYK2 163 aa12.32□□□□□ -0.44
VEGFB-204ENST00000543462 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 GPC2Q8N158 579 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 FAM84BQ96KN1 310 aaPredicted RBP12.31□□□□□ -0.44
VEGFB-204ENST00000543462 ZC3H12CQ9C0D7 883 aaKnown RBP12.31□□□□□ -0.44
VEGFB-204ENST00000543462 COA1Q9GZY4 146 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 KCNQ5Q9NR82 932 aa12.31□□□□□ -0.44
VEGFB-204ENST00000543462 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
VEGFB-204ENST00000543462 SCNN1DP51172 638 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 TFCP2Q12800 502 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 AAMPQ13685 434 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 LPIN2Q92539 896 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 GMLQ99445 158 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 CD209Q9NNX6 404 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 GPR108Q9NPR9 543 aa12.3□□□□□ -0.44
VEGFB-204ENST00000543462 PSMD14O00487 310 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 KIF3CO14782 793 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 VIL1P09327 827 aaKnown RBP12.29□□□□□ -0.44
VEGFB-204ENST00000543462 KCNJ4P48050 445 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 DACT2Q5SW24 774 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 TDRD7Q8NHU6 1098 aaKnown RBP12.29□□□□□ -0.44
VEGFB-204ENST00000543462 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 NMRK2Q9NPI5 230 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 CEP126Q9P2H0 1117 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 FAM205AQ6ZU69 1335 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 MYH7P12883 1935 aa12.29□□□□□ -0.44
VEGFB-204ENST00000543462 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
VEGFB-204ENST00000543462 HMMRO75330 724 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 SURF6O75683 361 aaKnown RBP12.28□□□□□ -0.44
VEGFB-204ENST00000543462 RAD17O75943 681 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 ADORA1P30542 326 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 GYG1P46976 350 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 EIF6P56537 245 aaKnown RBP12.28□□□□□ -0.44
VEGFB-204ENST00000543462 CIAPIN1Q6FI81 312 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 ZNF804AQ7Z570 1209 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 EXOC6BQ9Y2D4 811 aa12.28□□□□□ -0.44
VEGFB-204ENST00000543462 A0A1B0GUL7 405 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 SLC5A1P13866 664 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 PDS5AQ29RF7 1337 aaKnown RBP12.27□□□□□ -0.45
VEGFB-204ENST00000543462 CDK5RAP2Q96SN8 1893 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 MYH2Q9UKX2 1941 aa12.27□□□□□ -0.45
VEGFB-204ENST00000543462 TRPM7Q96QT4 1865 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 USP17L3A6NCW0 530 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 USP17L4A6NCW7 530 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 HIBADHP31937 336 aaKnown RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 GMPSP49915 693 aaPredicted RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 FKBP1AP62942 108 aaKnown RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 G3BP1Q13283 466 aaKnown RBP eCLIP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 HDAC1Q13547 482 aaPredicted RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 TNIP1Q15025 636 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 TNNI3KQ59H18 835 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 DPY19L2Q6NUT2 758 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 RSBN1LQ6PCB5 846 aaPredicted RBP12.26□□□□□ -0.45
VEGFB-204ENST00000543462 USP17L1Q7RTZ2 530 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 CERS5Q8N5B7 392 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 DPF2Q92785 391 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 GPRC5DQ9NZD1 345 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
VEGFB-204ENST00000543462 FOCADQ5VW36 1801 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 SHTN1A0MZ66 631 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 PHKA1P46020 1223 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 BCAMP50895 628 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 ZNF280AP59817 542 aaPredicted RBP12.25□□□□□ -0.45
VEGFB-204ENST00000543462 TIMM10P62072 90 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 HSP90AB4PQ58FF6 505 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 ERC1Q8IUD2 1116 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 RHPN1Q8TCX5 695 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
VEGFB-204ENST00000543462 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
VEGFB-204ENST00000543462 XAGE2Q96GT9 111 aa12.25□□□□□ -0.45
VEGFB-204ENST00000543462 GPBP1L1Q9HC44 474 aaPredicted RBP12.25□□□□□ -0.45
VEGFB-204ENST00000543462 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
VEGFB-204ENST00000543462 RAB11FIP3O75154 756 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 VEGFAP15692 232 aaPredicted RBP12.24□□□□□ -0.45
VEGFB-204ENST00000543462 ARID4AP29374 1257 aaPredicted RBP12.24□□□□□ -0.45
VEGFB-204ENST00000543462 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 AGBL3Q8NEM8 1001 aa12.24□□□□□ -0.45
VEGFB-204ENST00000543462 MYO3BQ8WXR4 1341 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms