RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 RTF1Q92541 710 aaKnown RBP11.05□□□□□ -0.64
LDHA-218ENST00000540430 TBC1D2BQ9UPU7 963 aa11.05□□□□□ -0.64
LDHA-218ENST00000540430 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
LDHA-218ENST00000540430 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
LDHA-218ENST00000540430 CARMIL3Q8ND23 1372 aa11.05□□□□□ -0.64
LDHA-218ENST00000540430 KCNQ3O43525 872 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 STX6O43752 255 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 F13A1P00488 732 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 A1BGP04217 495 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 CAPN2P17655 700 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 APLP1P51693 650 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 GIMAP6Q6P9H5 292 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 PALD1Q9ULE6 856 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 SALL3Q9BXA9 1300 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
LDHA-218ENST00000540430 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
LDHA-218ENST00000540430 C16orf45Q96MC5 204 aaPredicted RBP11.04□□□□□ -0.64
LDHA-218ENST00000540430 BRIP1Q9BX63 1249 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 YY1AP1Q9H869 796 aa11.04□□□□□ -0.64
LDHA-218ENST00000540430 ANKRD31Q8N7Z5 1873 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 PTPRCP08575 1304 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 CCDC171Q6TFL3 1326 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 LMNB1P20700 586 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 PDE6BP35913 854 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
LDHA-218ENST00000540430 TNRC6CQ9HCJ0 1690 aaKnown RBP11.03□□□□□ -0.64
LDHA-218ENST00000540430 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
LDHA-218ENST00000540430 CHMLP26374 656 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 RASSF7Q02833 373 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 FOXD4L6Q3SYB3 417 aaPredicted RBP11.03□□□□□ -0.64
LDHA-218ENST00000540430 KMT5BQ4FZB7 885 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 PRR5LQ6MZQ0 368 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 FOXD4L3Q6VB84 417 aaPredicted RBP11.03□□□□□ -0.64
LDHA-218ENST00000540430 MCM10Q7L590 875 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 CCDC186Q7Z3E2 898 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 C8orf58Q8NAV2 365 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 SETDB2Q96T68 719 aa11.03□□□□□ -0.64
LDHA-218ENST00000540430 NEMFO60524 1076 aa11.02□□□□□ -0.64
LDHA-218ENST00000540430 SYT1P21579 422 aa11.02□□□□□ -0.64
LDHA-218ENST00000540430 PLA2G4DQ86XP0 818 aa11.02□□□□□ -0.64
LDHA-218ENST00000540430 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.64
LDHA-218ENST00000540430 ERO1AQ96HE7 468 aa11.02□□□□□ -0.64
LDHA-218ENST00000540430 USP16Q9Y5T5 823 aa11.02□□□□□ -0.64
LDHA-218ENST00000540430 BCORQ6W2J9 1755 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 CDC25BP30305 580 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 HSPA4P34932 840 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 CEP135Q66GS9 1140 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 CNBD1Q8NA66 436 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 ANO2Q9NQ90 1003 aa11.02□□□□□ -0.65
LDHA-218ENST00000540430 CAVIN2O95810 425 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 CYP2C19P33261 490 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 FSTL1Q12841 308 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 MAP3K11Q16584 847 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 ZNF622Q969S3 477 aaKnown RBP eCLIP11.01□□□□□ -0.65
LDHA-218ENST00000540430 ELP1O95163 1332 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 ELL2O00472 640 aaPredicted RBP11.01□□□□□ -0.65
LDHA-218ENST00000540430 FIBPO43427 364 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
LDHA-218ENST00000540430 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 KCND1Q9NSA2 647 aa11.01□□□□□ -0.65
LDHA-218ENST00000540430 COL11A2P13942 1736 aaPredicted RBP11□□□□□ -0.65
LDHA-218ENST00000540430 AOX1Q06278 1338 aa11□□□□□ -0.65
LDHA-218ENST00000540430 DLG5Q8TDM6 1919 aa11□□□□□ -0.65
LDHA-218ENST00000540430 PRAMEF22A3QJZ6 481 aa11□□□□□ -0.65
LDHA-218ENST00000540430 KIF2AO00139 706 aaPredicted RBP11□□□□□ -0.65
LDHA-218ENST00000540430 NFKBIEO00221 500 aa11□□□□□ -0.65
LDHA-218ENST00000540430 RGL2O15211 777 aa11□□□□□ -0.65
LDHA-218ENST00000540430 NPHP1O15259 732 aa11□□□□□ -0.65
LDHA-218ENST00000540430 ZNF75DP51815 510 aa11□□□□□ -0.65
LDHA-218ENST00000540430 PRELPP51888 382 aa11□□□□□ -0.65
LDHA-218ENST00000540430 ST5P78524 1137 aa11□□□□□ -0.65
LDHA-218ENST00000540430 DCTN1Q14203 1278 aa11□□□□□ -0.65
LDHA-218ENST00000540430 TAF7Q15545 349 aaPredicted RBP11□□□□□ -0.65
LDHA-218ENST00000540430 CCDC88AQ3V6T2 1871 aa11□□□□□ -0.65
LDHA-218ENST00000540430 NOL8Q76FK4 1167 aaKnown RBP11□□□□□ -0.65
LDHA-218ENST00000540430 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
LDHA-218ENST00000540430 TTC14Q96N46 770 aa11□□□□□ -0.65
LDHA-218ENST00000540430 UPF3BQ9BZI7 483 aaKnown RBP11□□□□□ -0.65
LDHA-218ENST00000540430 STAP2Q9UGK3 403 aa11□□□□□ -0.65
LDHA-218ENST00000540430 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
LDHA-218ENST00000540430 MRVI1Q9Y6F6 885 aa11□□□□□ -0.65
LDHA-218ENST00000540430 GLTPD2A6NH11 291 aa11□□□□□ -0.65
LDHA-218ENST00000540430 TYRO3Q06418 890 aa11□□□□□ -0.65
LDHA-218ENST00000540430 BMS1Q14692 1282 aaKnown RBP11□□□□□ -0.65
LDHA-218ENST00000540430 NYAP1Q6ZVC0 841 aa11□□□□□ -0.65
LDHA-218ENST00000540430 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
LDHA-218ENST00000540430 GEMIN8Q9NWZ8 242 aaKnown RBP11□□□□□ -0.65
LDHA-218ENST00000540430 LIMCH1Q9UPQ0 1083 aa11□□□□□ -0.65
LDHA-218ENST00000540430 TIAM2Q8IVF5 1701 aa10.99□□□□□ -0.65
LDHA-218ENST00000540430 PIP4K2AP48426 406 aaPredicted RBP10.99□□□□□ -0.65
LDHA-218ENST00000540430 LRMPQ12912 555 aa10.99□□□□□ -0.65
LDHA-218ENST00000540430 NAA30Q147X3 362 aaPredicted RBP10.99□□□□□ -0.65
LDHA-218ENST00000540430 STYK1Q6J9G0 422 aa10.99□□□□□ -0.65
LDHA-218ENST00000540430 RBM43Q6ZSC3 357 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms