RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 USP17L8P0C7I0 530 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 GPSM2P81274 684 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 SREBF2Q12772 1141 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 ANGEL2Q5VTE6 544 aaKnown RBP7.75□□□□□ -1.17
CPSF7-219ENST00000539952 RSBN1LQ6PCB5 846 aaPredicted RBP7.75□□□□□ -1.17
CPSF7-219ENST00000539952 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 PODNQ7Z5L7 613 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 XAGE3Q8WTP9 111 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 CELF1Q92879 486 aaKnown RBP7.75□□□□□ -1.17
CPSF7-219ENST00000539952 PLEKHF1Q96S99 279 aa7.75□□□□□ -1.17
CPSF7-219ENST00000539952 AKAP11Q9UKA4 1901 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 UBE2Q2LH0YL09 131 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 TRIM28Q13263 835 aaKnown RBP7.74□□□□□ -1.17
CPSF7-219ENST00000539952 TTLL12Q14166 644 aaPredicted RBP7.74□□□□□ -1.17
CPSF7-219ENST00000539952 OGFOD1Q8N543 542 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 PLBD2Q8NHP8 589 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 FAM89AQ96GI7 184 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 MYOZ2Q9NPC6 264 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 ANKIB1Q9P2G1 1089 aa7.74□□□□□ -1.17
CPSF7-219ENST00000539952 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 USP17L3A6NCW0 530 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 USP17L4A6NCW7 530 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 C19orf67A6NJJ6 358 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 GTPBP6O43824 516 aaPredicted RBP7.73□□□□□ -1.17
CPSF7-219ENST00000539952 ANXA1P04083 346 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 RIPK4P57078 832 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 PROSER3Q2NL68 480 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 ERICH6BQ5W0A0 696 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 USP17L1Q7RTZ2 530 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 ARMC9Q7Z3E5 817 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 SPRYD3Q8NCJ5 442 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 GMLQ99445 158 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 ISCA1Q9BUE6 129 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 GGA1Q9UJY5 639 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 MAPK8IP3Q9UPT6 1336 aa7.73□□□□□ -1.17
CPSF7-219ENST00000539952 UNCXA6NJT0 531 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 IRS4O14654 1257 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-219ENST00000539952 ANP32CO43423 234 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 UFL1O94874 794 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 ATP2B4P23634 1241 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 LMOD3Q0VAK6 560 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 OTUD7BQ6GQQ9 843 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 MOB2Q70IA6 237 aa7.72□□□□□ -1.17
CPSF7-219ENST00000539952 ZNF467Q7Z7K2 595 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-219ENST00000539952 DBF4Q9UBU7 674 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-219ENST00000539952 ASTN2O75129 1339 aaPredicted RBP7.72□□□□□ -1.17
CPSF7-219ENST00000539952 MANSC4A6NHS7 340 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-219ENST00000539952 TNRC18O15417 2968 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-219ENST00000539952 PTPN12Q05209 780 aaKnown RBP7.71□□□□□ -1.18
CPSF7-219ENST00000539952 ARHGEF6Q15052 776 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 LDLRAD1Q5T700 205 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 ZBTB38Q8NAP3 1195 aaPredicted RBP7.71□□□□□ -1.18
CPSF7-219ENST00000539952 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 TMEM106CQ9BVX2 250 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 HYPKQ9NX55 129 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
CPSF7-219ENST00000539952 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 DLL1O00548 723 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 WNT10BO00744 389 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 HOXB7P09629 217 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 PSEN1P49768 467 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 NBPF9Q3BBW0 867 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 CCDC152Q4G0S7 254 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 PRAMEF18Q5VWM3 479 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 SPRYD7Q5W111 196 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 ERO1AQ96HE7 468 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 MS4A3Q96HJ5 214 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 PTPN22Q9Y2R2 807 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 XDHP47989 1333 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 MYO3BQ8WXR4 1341 aa7.7□□□□□ -1.18
CPSF7-219ENST00000539952 ZNF609O15014 1411 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 CHL1O00533 1208 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 PPP1R12BO60237 982 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 PDE8AO60658 829 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 FXR1P51114 621 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 MKRN3Q13064 507 aaKnown RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 PDAP1Q13442 181 aaKnown RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 RTL5Q5HYW3 569 aaPredicted RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 STRIP1Q5VSL9 837 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 RIC3Q7Z5B4 369 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 NBPF11Q86T75 865 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 ANKRD18AQ8IVF6 992 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 ZNF579Q8NAF0 562 aaKnown RBP7.69□□□□□ -1.18
CPSF7-219ENST00000539952 CHMP4AQ9BY43 222 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 SEC31BQ9NQW1 1179 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 CUL9Q8IWT3 2517 aa7.69□□□□□ -1.18
CPSF7-219ENST00000539952 POTEFA5A3E0 1075 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 TMPOP42166 694 aaKnown RBP7.68□□□□□ -1.18
CPSF7-219ENST00000539952 MAP3K11Q16584 847 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 SUPT20HL1Q3ZLR7 823 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 TTLL5Q6EMB2 1281 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 CCDC191Q8NCU4 936 aa7.68□□□□□ -1.18
CPSF7-219ENST00000539952 ARMC5Q96C12 935 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms