RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TIMM10P62072 90 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 SNED1Q8TER0 1413 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 KDM2BQ8NHM5 1336 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 WASHC4Q2M389 1173 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 AACSQ86V21 672 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 ZC3H12CQ9C0D7 883 aaKnown RBP18.96■□□□□ 0.63
DDB1-216ENST00000539739 VPS33BQ9H267 617 aa18.96■□□□□ 0.63
DDB1-216ENST00000539739 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.96■□□□□ 0.63
DDB1-216ENST00000539739 LTBP3Q9NS15 1303 aa18.95■□□□□ 0.62
DDB1-216ENST00000539739 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
DDB1-216ENST00000539739 NUCB1Q02818 461 aa18.95■□□□□ 0.62
DDB1-216ENST00000539739 EAF2Q96CJ1 260 aaPredicted RBP18.95■□□□□ 0.62
DDB1-216ENST00000539739 GOLGB1Q14789 3259 aaKnown RBP18.94■□□□□ 0.62
DDB1-216ENST00000539739 WTIPA6NIX2 430 aaPredicted RBP18.94■□□□□ 0.62
DDB1-216ENST00000539739 NFKBIEO00221 500 aa18.94■□□□□ 0.62
DDB1-216ENST00000539739 ZNF609O15014 1411 aa18.94■□□□□ 0.62
DDB1-216ENST00000539739 CAVIN4Q5BKX8 364 aa18.94■□□□□ 0.62
DDB1-216ENST00000539739 GORABQ5T7V8 394 aa18.94■□□□□ 0.62
DDB1-216ENST00000539739 C15orf52Q6ZUT6 534 aaKnown RBP18.94■□□□□ 0.62
DDB1-216ENST00000539739 CHD1LQ86WJ1 897 aa18.94■□□□□ 0.62
DDB1-216ENST00000539739 VPS37DQ86XT2 251 aa18.93■□□□□ 0.62
DDB1-216ENST00000539739 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
DDB1-216ENST00000539739 MED23Q9ULK4 1368 aa18.93■□□□□ 0.62
DDB1-216ENST00000539739 A0A1B0GUL6 1792 aa18.93■□□□□ 0.62
DDB1-216ENST00000539739 G3V3G9 751 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 DCAF8Q5TAQ9 597 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 XAGE2Q96GT9 111 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
DDB1-216ENST00000539739 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 ZNF277Q9NRM2 450 aaPredicted RBP18.92■□□□□ 0.62
DDB1-216ENST00000539739 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 RASSF7Q02833 373 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 KIAA2012Q0VF49 1180 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 ZNF804AQ7Z570 1209 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 DUOX1Q9NRD9 1551 aa18.92■□□□□ 0.62
DDB1-216ENST00000539739 FER1L6Q2WGJ9 1857 aa18.91■□□□□ 0.62
DDB1-216ENST00000539739 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
DDB1-216ENST00000539739 AOC3Q16853 763 aa18.91■□□□□ 0.62
DDB1-216ENST00000539739 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
DDB1-216ENST00000539739 KLRK1P26718 216 aa18.9■□□□□ 0.62
DDB1-216ENST00000539739 ADORA1P30542 326 aa18.9■□□□□ 0.62
DDB1-216ENST00000539739 HIBADHP31937 336 aaKnown RBP18.9■□□□□ 0.62
DDB1-216ENST00000539739 CCDC158Q5M9N0 1113 aa18.9■□□□□ 0.62
DDB1-216ENST00000539739 TXNRD3Q86VQ6 643 aa18.9■□□□□ 0.62
DDB1-216ENST00000539739 FAM84BQ96KN1 310 aaPredicted RBP18.9■□□□□ 0.62
DDB1-216ENST00000539739 DBNDD2Q9BQY9 259 aa18.9■□□□□ 0.62
DDB1-216ENST00000539739 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
DDB1-216ENST00000539739 GYG1P46976 350 aa18.89■□□□□ 0.62
DDB1-216ENST00000539739 BCAMP50895 628 aa18.89■□□□□ 0.62
DDB1-216ENST00000539739 FBXO33Q7Z6M2 555 aa18.89■□□□□ 0.62
DDB1-216ENST00000539739 GPATCH3Q96I76 525 aa18.89■□□□□ 0.62
DDB1-216ENST00000539739 COA1Q9GZY4 146 aa18.89■□□□□ 0.62
DDB1-216ENST00000539739 GNL3LQ9NVN8 582 aaKnown RBP18.89■□□□□ 0.62
DDB1-216ENST00000539739 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
DDB1-216ENST00000539739 LMNB1P20700 586 aa18.89■□□□□ 0.61
DDB1-216ENST00000539739 CCDC102BQ68D86 513 aa18.89■□□□□ 0.61
DDB1-216ENST00000539739 JDP2Q8WYK2 163 aa18.89■□□□□ 0.61
DDB1-216ENST00000539739 TLR7Q9NYK1 1049 aaKnown RBP18.89■□□□□ 0.61
DDB1-216ENST00000539739 TTC39AQ5SRH9 613 aa18.88■□□□□ 0.61
DDB1-216ENST00000539739 NIM1KQ8IY84 436 aa18.88■□□□□ 0.61
DDB1-216ENST00000539739 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
DDB1-216ENST00000539739 FRAT2O75474 233 aaPredicted RBP18.87■□□□□ 0.61
DDB1-216ENST00000539739 DOK7Q18PE1 504 aa18.87■□□□□ 0.61
DDB1-216ENST00000539739 CD209Q9NNX6 404 aa18.87■□□□□ 0.61
DDB1-216ENST00000539739 UQCRFS1P1P0C7P4 283 aa18.86■□□□□ 0.61
DDB1-216ENST00000539739 PHKA1P46020 1223 aa18.86■□□□□ 0.61
DDB1-216ENST00000539739 PODNQ7Z5L7 613 aa18.86■□□□□ 0.61
DDB1-216ENST00000539739 DBNDD1Q9H9R9 158 aa18.86■□□□□ 0.61
DDB1-216ENST00000539739 ECE2O60344 883 aa18.85■□□□□ 0.61
DDB1-216ENST00000539739 MX1P20591 662 aa18.85■□□□□ 0.61
DDB1-216ENST00000539739 ECHDC1Q9NTX5 307 aa18.85■□□□□ 0.61
DDB1-216ENST00000539739 IL1R1P14778 569 aa18.85■□□□□ 0.61
DDB1-216ENST00000539739 TTC41PQ6P2S7 1318 aa18.85■□□□□ 0.61
DDB1-216ENST00000539739 ARAP2Q8WZ64 1704 aa18.84■□□□□ 0.61
DDB1-216ENST00000539739 SEMA3EO15041 775 aa18.84■□□□□ 0.61
DDB1-216ENST00000539739 ERC2O15083 957 aa18.84■□□□□ 0.61
DDB1-216ENST00000539739 ARID4AP29374 1257 aaPredicted RBP18.84■□□□□ 0.61
DDB1-216ENST00000539739 TDRD7Q8NHU6 1098 aaKnown RBP18.84■□□□□ 0.61
DDB1-216ENST00000539739 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
DDB1-216ENST00000539739 ZNF512BQ96KM6 892 aaPredicted RBP18.84■□□□□ 0.61
DDB1-216ENST00000539739 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
DDB1-216ENST00000539739 ZNRF3Q9ULT6 936 aa18.84■□□□□ 0.61
DDB1-216ENST00000539739 PRELPP51888 382 aa18.83■□□□□ 0.61
DDB1-216ENST00000539739 DENND2AQ9ULE3 1009 aa18.83■□□□□ 0.61
DDB1-216ENST00000539739 IQSEC3Q9UPP2 1182 aaPredicted RBP18.83■□□□□ 0.61
DDB1-216ENST00000539739 ZBTB22O15209 634 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 ATP5JP18859 108 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 PDE1AP54750 535 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 C9orf131Q5VYM1 1079 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.82■□□□□ 0.6
DDB1-216ENST00000539739 STAP2Q9UGK3 403 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 SALL3Q9BXA9 1300 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 UTRNP46939 3433 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 PDE4AP27815 886 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
DDB1-216ENST00000539739 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
DDB1-216ENST00000539739 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
DDB1-216ENST00000539739 AOX1Q06278 1338 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms