RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GOLGA8BA8MQT2 603 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 ATP2B1P20020 1258 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 IMMTQ16891 758 aaKnown RBP10.25□□□□□ -0.77
UBE3B-208ENST00000538070 SLC4A8Q2Y0W8 1093 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 MYL10Q9BUA6 226 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 SEC31BQ9NQW1 1179 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 CCDC39Q9UFE4 941 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 ABCF2Q9UG63 623 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 CAMTA1Q9Y6Y1 1673 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 KDM3BQ7LBC6 1761 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 EPB41L2O43491 1005 aaKnown RBP10.25□□□□□ -0.77
UBE3B-208ENST00000538070 PHKA1P46020 1223 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 MAP3K11Q16584 847 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 ZNF213O14771 459 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 NR1I2O75469 434 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 FGAP02671 866 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 CCDC192P0DO97 292 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 KIAA2012Q0VF49 1180 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 TRDNQ13061 729 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 ISM2Q6H9L7 571 aa10.25□□□□□ -0.77
UBE3B-208ENST00000538070 LEO1Q8WVC0 666 aaPredicted RBP10.25□□□□□ -0.77
UBE3B-208ENST00000538070 GPAA1O43292 621 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 PRC1O43663 620 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 ZMYM1Q5SVZ6 1142 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 SASS6Q6UVJ0 657 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 MIGA1Q8NAN2 632 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 JAG2Q9Y219 1238 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.24□□□□□ -0.77
UBE3B-208ENST00000538070 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 MICU3Q86XE3 530 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 ZKSCAN3Q9BRR0 538 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 FAM13BQ9NYF5 915 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 LMO7Q8WWI1 1683 aa10.24□□□□□ -0.77
UBE3B-208ENST00000538070 ANO6Q4KMQ2 910 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 ZBTB38Q8NAP3 1195 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-208ENST00000538070 DNAJC25Q9H1X3 360 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 MCAMP43121 646 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
UBE3B-208ENST00000538070 TTLL11Q8NHH1 800 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 AIDAQ96BJ3 306 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 TRIM5Q9C035 493 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 HELLSQ9NRZ9 838 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 ISCA1Q9BUE6 129 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 SCAND2PQ9GZW5 306 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-208ENST00000538070 SOS2Q07890 1332 aaPredicted RBP10.23□□□□□ -0.77
UBE3B-208ENST00000538070 MAP3K15Q6ZN16 1313 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 ADAMTSL3P82987 1691 aa10.23□□□□□ -0.77
UBE3B-208ENST00000538070 ZRSR1Q15695 479 aaKnown RBP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 NIP7Q9Y221 180 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 B4E1Z4 1266 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 BIN1O00499 593 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 PCCAP05165 728 aaPredicted RBP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 CTSWP56202 376 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 TYRO3Q06418 890 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 DDB1Q16531 1140 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 CCAR1Q8IX12 1150 aaKnown RBP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 AIFM3Q96NN9 605 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 SDF4Q9BRK5 362 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 ORC3Q9UBD5 711 aaPredicted RBP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 ZKSCAN5Q9Y2L8 839 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 NSUN7Q8NE18 718 aaKnown RBP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.22□□□□□ -0.77
UBE3B-208ENST00000538070 WWC3Q9ULE0 1092 aa10.22□□□□□ -0.77
UBE3B-208ENST00000538070 MINDY4BA8MYZ0 360 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 KCNQ2O43526 872 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 CTDSPL2Q05D32 466 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 STK38Q15208 465 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 LRRFIP1Q32MZ4 808 aaKnown RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 CCDC73Q6ZRK6 1079 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 CMTR1Q8N1G2 835 aaKnown RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 MAGEB6Q8N7X4 407 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 KCNB2Q92953 911 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 PHKBQ93100 1093 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 PGBD1Q96JS3 809 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 USP28Q96RU2 1077 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 TEX13AQ9BXU3 409 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 PIH1D3Q9NQM4 214 aaKnown RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 MTMR7Q9Y216 660 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 ZNF532Q9HCE3 1301 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 WTIPA6NIX2 430 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 MARCKSP29966 332 aaPredicted RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 ADD1P35611 737 aaKnown RBP10.21□□□□□ -0.77
UBE3B-208ENST00000538070 C8orf76Q96K31 380 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 ARMT1Q9H993 441 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 LRP2BPQ9P2M1 347 aa10.21□□□□□ -0.77
UBE3B-208ENST00000538070 COL5A2P05997 1499 aaPredicted RBP10.21□□□□□ -0.78
UBE3B-208ENST00000538070 C5P01031 1676 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 A0A1B0GVL5 298 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 LETM1O95202 739 aaPredicted RBP10.21□□□□□ -0.78
UBE3B-208ENST00000538070 CYP19A1P11511 503 aaPredicted RBP10.21□□□□□ -0.78
UBE3B-208ENST00000538070 BCAMP50895 628 aa10.21□□□□□ -0.78
UBE3B-208ENST00000538070 CCDC102BQ68D86 513 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms