RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
CSDE1-217ENST00000534699 MROH5Q6ZUA9 1318 aa13.11□□□□□ -0.31
CSDE1-217ENST00000534699 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
CSDE1-217ENST00000534699 ZNF804AQ7Z570 1209 aa13.11□□□□□ -0.31
CSDE1-217ENST00000534699 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
CSDE1-217ENST00000534699 WBP1LQ9NX94 342 aa13.11□□□□□ -0.31
CSDE1-217ENST00000534699 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 IL1R1P14778 569 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 VEGFBP49765 207 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 HIRAP54198 1017 aaPredicted RBP13.1□□□□□ -0.31
CSDE1-217ENST00000534699 DOK7Q18PE1 504 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 KCNJ4P48050 445 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 CHRNDQ07001 517 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 CCDC102AQ96A19 550 aa13.1□□□□□ -0.31
CSDE1-217ENST00000534699 OGFOD1Q8N543 542 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
CSDE1-217ENST00000534699 LAMB1P07942 1786 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 CST9Q5W186 159 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
CSDE1-217ENST00000534699 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.31
CSDE1-217ENST00000534699 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.31
CSDE1-217ENST00000534699 APOBEC3FQ8IUX4 373 aaKnown RBP13.08□□□□□ -0.31
CSDE1-217ENST00000534699 MKRN1Q9UHC7 482 aaKnown RBP13.08□□□□□ -0.31
CSDE1-217ENST00000534699 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
CSDE1-217ENST00000534699 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
CSDE1-217ENST00000534699 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.32
CSDE1-217ENST00000534699 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
CSDE1-217ENST00000534699 CELF2O95319 508 aaKnown RBP13.07□□□□□ -0.32
CSDE1-217ENST00000534699 HTRA3P83110 453 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 NOGQ13253 232 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 LDHAL6AQ6ZMR3 332 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 KRT26Q7Z3Y9 468 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 JARID2Q92833 1246 aaPredicted RBP13.07□□□□□ -0.32
CSDE1-217ENST00000534699 ZBED3Q96IU2 234 aaPredicted RBP13.07□□□□□ -0.32
CSDE1-217ENST00000534699 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 SAGE1Q9NXZ1 904 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 SUGT1Q9Y2Z0 365 aa13.07□□□□□ -0.32
CSDE1-217ENST00000534699 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
CSDE1-217ENST00000534699 F6X3S4 739 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 SSH1Q8WYL5 1049 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 GBA2Q9HCG7 927 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-217ENST00000534699 ZBTB12Q9Y330 459 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-217ENST00000534699 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
CSDE1-217ENST00000534699 BEGAINQ9BUH8 593 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 GLIS2Q9BZE0 524 aaPredicted RBP13.06□□□□□ -0.32
CSDE1-217ENST00000534699 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
CSDE1-217ENST00000534699 TTLL5Q6EMB2 1281 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 USP48Q86UV5 1035 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 CNNM1Q9NRU3 951 aa13.06□□□□□ -0.32
CSDE1-217ENST00000534699 NF2P35240 595 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 SCARF1Q14162 830 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 TBC1D10BQ4KMP7 808 aaPredicted RBP13.05□□□□□ -0.32
CSDE1-217ENST00000534699 SAMD7Q7Z3H4 446 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 TBC1D22AQ8WUA7 517 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
CSDE1-217ENST00000534699 IGSF3O75054 1194 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 CIAO1O76071 339 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
CSDE1-217ENST00000534699 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
CSDE1-217ENST00000534699 SLC4A10Q6U841 1118 aa13.04□□□□□ -0.32
CSDE1-217ENST00000534699 TDRD7Q8NHU6 1098 aaKnown RBP13.04□□□□□ -0.32
CSDE1-217ENST00000534699 SASH1O94885 1247 aa13.04□□□□□ -0.32
CSDE1-217ENST00000534699 GPR101Q96P66 508 aaPredicted RBP13.04□□□□□ -0.32
CSDE1-217ENST00000534699 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
CSDE1-217ENST00000534699 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
CSDE1-217ENST00000534699 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 TRAF5O00463 557 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 MAST3O60307 1309 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 CDCA5Q96FF9 252 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 USP44Q9H0E7 712 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
CSDE1-217ENST00000534699 MYO1BO43795 1136 aa13.02□□□□□ -0.32
CSDE1-217ENST00000534699 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.32
CSDE1-217ENST00000534699 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.33
CSDE1-217ENST00000534699 GNAI3P08754 354 aa13.02□□□□□ -0.33
CSDE1-217ENST00000534699 HSPA8P11142 646 aaKnown RBP13.02□□□□□ -0.33
CSDE1-217ENST00000534699 HIBADHP31937 336 aaKnown RBP13.02□□□□□ -0.33
CSDE1-217ENST00000534699 CAVIN4Q5BKX8 364 aa13.02□□□□□ -0.33
CSDE1-217ENST00000534699 NOM1Q5C9Z4 860 aaKnown RBP13.02□□□□□ -0.33
CSDE1-217ENST00000534699 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
CSDE1-217ENST00000534699 FOXN1O15353 648 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 SLC10A3P09131 477 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 BICC1Q9H694 974 aaKnown RBP13.01□□□□□ -0.33
CSDE1-217ENST00000534699 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 SEMA3EO15041 775 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 NBPF7P0C2Y1 421 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms